RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PLCB4Q15147 1175 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 RINT1Q6NUQ1 792 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 C6orf89Q6UWU4 347 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 PASD1Q8IV76 773 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 ZFPM1Q8IX07 1006 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 SYT2Q8N9I0 419 aaPredicted RBP13.65□□□□□ -0.22
VPS52-218ENST00000482399 ZNF564Q8TBZ8 553 aaPredicted RBP13.65□□□□□ -0.22
VPS52-218ENST00000482399 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.65□□□□□ -0.22
VPS52-218ENST00000482399 NAP1L4Q99733 375 aaKnown RBP13.65□□□□□ -0.22
VPS52-218ENST00000482399 CARD9Q9H257 536 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 ALG13Q9NP73 1137 aaKnown RBP13.65□□□□□ -0.22
VPS52-218ENST00000482399 DONSONQ9NYP3 566 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 ANAPC7Q9UJX3 599 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 ANAPC5Q9UJX4 755 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 INTUQ9ULD6 942 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 SYNGAP1Q96PV0 1343 aa13.65□□□□□ -0.23
VPS52-218ENST00000482399 ANKRD63C9JTQ0 380 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 F5H6K3 240 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 GOLGA8SH3BPF8 625 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 GOLGA8MH3BSY2 632 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 hCG_1984214I3L0E3 225 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 MSH4O15457 936 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 CTNNA2P26232 953 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 RPA1P27694 616 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 KLRC3Q07444 240 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 DDR1Q08345 913 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 ZNF713Q8N859 430 aaPredicted RBP13.64□□□□□ -0.23
VPS52-218ENST00000482399 MIEF2Q96C03 454 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 MCM8Q9UJA3 840 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 ASTN1O14525 1302 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 KIF13AQ9H1H9 1805 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 TAF1P21675 1872 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 RASA4BC9J798 803 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 RASA4O43374 803 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 PHF2O75151 1096 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 GAS8O95995 478 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 CHRNA3P32297 505 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 RHBDL3P58872 404 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 DLG4P78352 724 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 SLMAPQ14BN4 828 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 DCAF12L1Q5VU92 463 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 RFX8Q6ZV50 586 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 CDC42EP4Q9H3Q1 356 aaKnown RBP13.64□□□□□ -0.23
VPS52-218ENST00000482399 COG5Q9UP83 839 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 PCDHAC2Q9Y5I4 1007 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 BCL9LQ86UU0 1499 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 CHD4Q14839 1912 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 KIAA0391O15091 583 aaKnown RBP13.64□□□□□ -0.23
VPS52-218ENST00000482399 SGPL1O95470 568 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 MAPK4P31152 587 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 MXI1P50539 228 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 RNASELQ05823 741 aaKnown RBP13.64□□□□□ -0.23
VPS52-218ENST00000482399 ORC2Q13416 577 aaPredicted RBP13.64□□□□□ -0.23
VPS52-218ENST00000482399 PPP2R5EQ16537 467 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 LMBRD2Q68DH5 695 aaPredicted RBP13.64□□□□□ -0.23
VPS52-218ENST00000482399 SPATA21Q7Z572 469 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 FMNL3Q8IVF7 1028 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 C4orf33Q8N1A6 199 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 PRELID2Q8N945 189 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 TBC1D22AQ8WUA7 517 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 HES6Q96HZ4 224 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 DCTN4Q9UJW0 460 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 TMEM59LQ9UK28 342 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 AGAP1Q9UPQ3 857 aa13.64□□□□□ -0.23
VPS52-218ENST00000482399 CTDP1Q9Y5B0 961 aaPredicted RBP13.64□□□□□ -0.23
VPS52-218ENST00000482399 MYO3BQ8WXR4 1341 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 FAM187AA6NFU0 413 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 PODXLO00592 558 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 AGTP01019 485 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 ATP2B4P23634 1241 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 POLD1P28340 1107 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 GSCP56915 257 aaPredicted RBP13.63□□□□□ -0.23
VPS52-218ENST00000482399 DNAJC3Q13217 504 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 RHOT2Q8IXI1 618 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 SUPT20HQ8NEM7 779 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 TEKT1Q969V4 418 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 TMEM237Q96Q45 408 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 RPS6KA4O75676 772 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 GH2P01242 217 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 RWDD2BP57060 319 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 DHX34Q14147 1143 aaKnown RBP13.63□□□□□ -0.23
VPS52-218ENST00000482399 FAM228AQ86W67 206 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 SPIRE2Q8WWL2 714 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 RUNDC3BQ96NL0 473 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 ZNF577Q9BSK1 485 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 KDM4CQ9H3R0 1056 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 POLLQ9UGP5 575 aa13.63□□□□□ -0.23
VPS52-218ENST00000482399 CICQ96RK0 1608 aaPredicted RBP13.63□□□□□ -0.23
VPS52-218ENST00000482399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.62□□□□□ -0.23
VPS52-218ENST00000482399 EDIL3O43854 480 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 COBLL1Q53SF7 1204 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 FAM102BQ5T8I3 360 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 DUPD1Q68J44 220 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 PHLDB3Q6NSJ2 640 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 AGPAT3Q9NRZ7 376 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 TMEM150BA6NC51 233 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 PI4K2BG5E9Z4 385 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 RIPK2O43353 540 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 PPFIA2O75334 1257 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 RARAP10276 462 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms