RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 ZKSCAN2Q63HK3 967 aa3.81□□□□□ -1.8
KDM1A-204ENST00000481879 SUPT20HQ8NEM7 779 aa3.81□□□□□ -1.8
KDM1A-204ENST00000481879 OR5M3Q8NGP4 307 aa3.81□□□□□ -1.8
KDM1A-204ENST00000481879 NOL10Q9BSC4 688 aaKnown RBP3.81□□□□□ -1.8
KDM1A-204ENST00000481879 SOX7Q9BT81 388 aa3.81□□□□□ -1.8
KDM1A-204ENST00000481879 NDC1Q9BTX1 674 aa3.81□□□□□ -1.8
KDM1A-204ENST00000481879 MYL10Q9BUA6 226 aa3.81□□□□□ -1.8
KDM1A-204ENST00000481879 SERHL2Q9H4I8 314 aa3.81□□□□□ -1.8
KDM1A-204ENST00000481879 MTG2Q9H4K7 406 aa3.81□□□□□ -1.8
KDM1A-204ENST00000481879 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.81□□□□□ -1.8
KDM1A-204ENST00000481879 TMEM200CA6NKL6 621 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 LPXNO60711 386 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 OPHN1O60890 802 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 ALDH1A2O94788 518 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 RAPGEF3O95398 923 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 ASLP04424 464 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 GAAP10253 952 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 SLC9A1P19634 815 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 FAM189BP81408 668 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 RBL2Q08999 1139 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 COLEC12Q5KU26 742 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 KIAA1841Q6NSI8 718 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 UNQ6494/PRO21346Q6UXR6 183 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 Q6YL49 198 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 LCORLQ8N3X6 602 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 C7orf31Q8N865 590 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 OR52N2Q8NGI0 321 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 HIST1H2AHQ96KK5 128 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 SRPK1Q96SB4 655 aaKnown RBP3.8□□□□□ -1.8
KDM1A-204ENST00000481879 DCLRE1CQ96SD1 692 aaKnown RBP3.8□□□□□ -1.8
KDM1A-204ENST00000481879 ELF4Q99607 663 aaPredicted RBP3.8□□□□□ -1.8
KDM1A-204ENST00000481879 HIST1H2AJQ99878 128 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 WDR11Q9BZH6 1224 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 ANKFY1Q9P2R3 1169 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 B4GALT6Q9UBX8 382 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 HDAC5Q9UQL6 1122 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 COX11Q9Y6N1 276 aa3.8□□□□□ -1.8
KDM1A-204ENST00000481879 RNASET2O00584 256 aaKnown RBP3.79□□□□□ -1.8
KDM1A-204ENST00000481879 CFBP00751 764 aa3.79□□□□□ -1.8
KDM1A-204ENST00000481879 ZNF37AP17032 561 aaPredicted RBP3.79□□□□□ -1.8
KDM1A-204ENST00000481879 APOBEC3AP31941 199 aaPredicted RBP3.79□□□□□ -1.8
KDM1A-204ENST00000481879 CASRP41180 1078 aa3.79□□□□□ -1.8
KDM1A-204ENST00000481879 AVPR1BP47901 424 aa3.79□□□□□ -1.8
KDM1A-204ENST00000481879 CLK3P49761 638 aaKnown RBP3.79□□□□□ -1.8
KDM1A-204ENST00000481879 MRPL49Q13405 166 aaKnown RBP3.79□□□□□ -1.8
KDM1A-204ENST00000481879 ESRP1Q6NXG1 681 aaKnown RBP3.79□□□□□ -1.8
KDM1A-204ENST00000481879 ARHGEF19Q8IW93 802 aa3.79□□□□□ -1.8
KDM1A-204ENST00000481879 UNC5BQ8IZJ1 945 aa3.79□□□□□ -1.8
KDM1A-204ENST00000481879 LILRA3Q8N6C8 439 aaPredicted RBP3.79□□□□□ -1.8
KDM1A-204ENST00000481879 PPP1R14CQ8TAE6 165 aa3.79□□□□□ -1.8
KDM1A-204ENST00000481879 C8orf37Q96NL8 207 aa3.79□□□□□ -1.8
KDM1A-204ENST00000481879 CLUHP3Q96NS8 147 aa3.79□□□□□ -1.8
KDM1A-204ENST00000481879 LSM14BQ9BX40 385 aaKnown RBP3.79□□□□□ -1.8
KDM1A-204ENST00000481879 CPEB1Q9BZB8 566 aaKnown RBP3.79□□□□□ -1.8
KDM1A-204ENST00000481879 AKIP1Q9NQ31 210 aa3.79□□□□□ -1.8
KDM1A-204ENST00000481879 TRPM5Q9NZQ8 1165 aa3.79□□□□□ -1.8
KDM1A-204ENST00000481879 SPO11Q9Y5K1 396 aa3.79□□□□□ -1.8
KDM1A-204ENST00000481879 PTCH2Q9Y6C5 1203 aa3.79□□□□□ -1.8
KDM1A-204ENST00000481879 MYPNQ86TC9 1320 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 OPA1O60313 960 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 WNT3AP56704 352 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 CD69Q07108 199 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 FNDC3BQ53EP0 1204 aaKnown RBP3.78□□□□□ -1.8
KDM1A-204ENST00000481879 C2orf27AQ580R0 203 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 PIK3R6Q5UE93 754 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 CCDC62Q6P9F0 684 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 UBE2R2Q712K3 238 aaPredicted RBP3.78□□□□□ -1.8
KDM1A-204ENST00000481879 DOK3Q7L591 496 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 RD3Q7Z3Z2 195 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 GDF7Q7Z4P5 450 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 ZZZ3Q8IYH5 903 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 PIK3C3Q8NEB9 887 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 MKL1Q969V6 931 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 ARMC5Q96C12 935 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 IL17RAQ96F46 866 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 POFUT1Q9H488 388 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 TOMM22Q9NS69 142 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 SYBUQ9NX95 663 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 CLCA2Q9UQC9 943 aa3.78□□□□□ -1.8
KDM1A-204ENST00000481879 EPN1Q9Y6I3 576 aaPredicted RBP3.78□□□□□ -1.8
KDM1A-204ENST00000481879 GAGE12BA1L429 117 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 GAGE12HA6NDE8 117 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 CBX4O00257 560 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 DNAJC8O75937 253 aaPredicted RBP3.77□□□□□ -1.81
KDM1A-204ENST00000481879 NCR1O76036 304 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 PCDH8O95206 1070 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 NDUFA10O95299 355 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 HSP90B1P14625 803 aaKnown RBP3.77□□□□□ -1.81
KDM1A-204ENST00000481879 FLT3P36888 993 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 BMPR1AP36894 532 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 KRTAP10-11P60412 298 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 FBXO42Q6P3S6 717 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 CMTR2Q8IYT2 770 aaKnown RBP3.77□□□□□ -1.81
KDM1A-204ENST00000481879 RTF1Q92541 710 aaKnown RBP3.77□□□□□ -1.81
KDM1A-204ENST00000481879 CAVIN3Q969G5 261 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 COQ10AQ96MF6 247 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 DKK2Q9UBU2 259 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 INSL6Q9Y581 213 aa3.77□□□□□ -1.81
KDM1A-204ENST00000481879 PRR5-ARHGAP8B1AHC4 643 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 DIRC3C9JPN6 131 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms