RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 CKAP4Q07065 602 aaKnown RBP17.16■□□□□ 0.34
RXRA-202ENST00000481739 MAP2K5Q13163 448 aa17.16■□□□□ 0.34
RXRA-202ENST00000481739 TTLL4Q14679 1199 aa17.16■□□□□ 0.34
RXRA-202ENST00000481739 PLA2G4FQ68DD2 849 aa17.16■□□□□ 0.34
RXRA-202ENST00000481739 USP37Q86T82 979 aa17.16■□□□□ 0.34
RXRA-202ENST00000481739 TMEM161BQ8NDZ6 487 aa17.16■□□□□ 0.34
RXRA-202ENST00000481739 NPLOC4Q8TAT6 608 aa17.16■□□□□ 0.34
RXRA-202ENST00000481739 SIX2Q9NPC8 291 aa17.16■□□□□ 0.34
RXRA-202ENST00000481739 PDLIM7Q9NR12 457 aa17.16■□□□□ 0.34
RXRA-202ENST00000481739 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.16■□□□□ 0.34
RXRA-202ENST00000481739 PPME1Q9Y570 386 aa17.16■□□□□ 0.34
RXRA-202ENST00000481739 SAR1BQ9Y6B6 198 aa17.16■□□□□ 0.34
RXRA-202ENST00000481739 CTAGE15A4D2H0 777 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 FARP2O94887 1054 aaPredicted RBP17.15■□□□□ 0.34
RXRA-202ENST00000481739 CTAGE8P0CG41 777 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 NPTX2P47972 431 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 MYL7Q01449 175 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 MORN1Q5T089 497 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 CTAGE6Q86UF2 777 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 KSR1Q8IVT5 923 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 CTAGE4Q8IX94 777 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 REM2Q8IYK8 340 aaPredicted RBP17.15■□□□□ 0.34
RXRA-202ENST00000481739 LRRN4CLQ8ND94 238 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 SCFD2Q8WU76 684 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 VTA1Q9NP79 307 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 CYP26B1Q9NR63 512 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 TBX20Q9UMR3 447 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 MAFBQ9Y5Q3 323 aaPredicted RBP17.15■□□□□ 0.34
RXRA-202ENST00000481739 FHOD1Q9Y613 1164 aa17.15■□□□□ 0.34
RXRA-202ENST00000481739 BTNL10A8MVZ5 291 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 PRLRP16471 622 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 STAT1P42224 750 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 GFPT1Q06210 699 aaPredicted RBP17.14■□□□□ 0.34
RXRA-202ENST00000481739 METTL7BQ6UX53 244 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 IRF2BP2Q7Z5L9 587 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 CCDC60Q8IWA6 550 aaPredicted RBP17.14■□□□□ 0.34
RXRA-202ENST00000481739 DHX37Q8IY37 1157 aaKnown RBP17.14■□□□□ 0.34
RXRA-202ENST00000481739 IFT74Q96LB3 600 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 NOX5Q96PH1 765 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 TINF2Q9BSI4 451 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 STK33Q9BYT3 514 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 KMT5AQ9NQR1 393 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 HSPBP1Q9NZL4 362 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 TSKSQ9UJT2 592 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 WDR81Q562E7 1941 aa17.14■□□□□ 0.34
RXRA-202ENST00000481739 MACROD2A1Z1Q3 448 aa17.14■□□□□ 0.33
RXRA-202ENST00000481739 SLC16A4O15374 487 aa17.14■□□□□ 0.33
RXRA-202ENST00000481739 ACTN1P12814 892 aa17.14■□□□□ 0.33
RXRA-202ENST00000481739 CYP2B6P20813 491 aa17.14■□□□□ 0.33
RXRA-202ENST00000481739 VAMP7P51809 220 aa17.14■□□□□ 0.33
RXRA-202ENST00000481739 FBXO38Q6PIJ6 1188 aa17.14■□□□□ 0.33
RXRA-202ENST00000481739 MAMDC4Q6UXC1 1216 aa17.14■□□□□ 0.33
RXRA-202ENST00000481739 CCDC94Q9BW85 323 aaPredicted RBP17.14■□□□□ 0.33
RXRA-202ENST00000481739 GPRC5CQ9NQ84 441 aa17.14■□□□□ 0.33
RXRA-202ENST00000481739 ZNF302Q9NR11 478 aa17.14■□□□□ 0.33
RXRA-202ENST00000481739 SEPT9Q9UHD8 586 aaPredicted RBP17.14■□□□□ 0.33
RXRA-202ENST00000481739 ZNF236Q9UL36 1845 aa17.14■□□□□ 0.33
RXRA-202ENST00000481739 IGKV6D-21A0A0A0MT36 114 aa17.13■□□□□ 0.33
RXRA-202ENST00000481739 CCDC169A6NNP5 214 aa17.13■□□□□ 0.33
RXRA-202ENST00000481739 NOP56O00567 594 aaKnown RBP17.13■□□□□ 0.33
RXRA-202ENST00000481739 SNAI1O95863 264 aaPredicted RBP17.13■□□□□ 0.33
RXRA-202ENST00000481739 BRDTQ58F21 947 aaPredicted RBP17.13■□□□□ 0.33
RXRA-202ENST00000481739 CELF3Q5SZQ8 465 aaKnown RBP17.13■□□□□ 0.33
RXRA-202ENST00000481739 IQCEQ6IPM2 695 aa17.13■□□□□ 0.33
RXRA-202ENST00000481739 COPS5Q92905 334 aa17.13■□□□□ 0.33
RXRA-202ENST00000481739 APEX2Q9UBZ4 518 aa17.13■□□□□ 0.33
RXRA-202ENST00000481739 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
RXRA-202ENST00000481739 USP20Q9Y2K6 914 aa17.13■□□□□ 0.33
RXRA-202ENST00000481739 MYH9P35579 1960 aaKnown RBP17.13■□□□□ 0.33
RXRA-202ENST00000481739 SYNGAP1Q96PV0 1343 aa17.13■□□□□ 0.33
RXRA-202ENST00000481739 TMEM150BA6NC51 233 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 KIAA0391O15091 583 aaKnown RBP17.12■□□□□ 0.33
RXRA-202ENST00000481739 TBC1D8O95759 1140 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 OATP04181 439 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 RGS2P41220 211 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 BMS1Q14692 1282 aaKnown RBP17.12■□□□□ 0.33
RXRA-202ENST00000481739 TEX35Q5T0J7 233 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 FAM160B1Q5W0V3 765 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 TAPT1Q6NXT6 567 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 CCDC62Q6P9F0 684 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 SEPT1Q8WYJ6 367 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 SPATA33Q96N06 139 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 SH2D3AQ9BRG2 576 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 INTS2Q9H0H0 1204 aaKnown RBP17.12■□□□□ 0.33
RXRA-202ENST00000481739 IKZF4Q9H2S9 585 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 INTUQ9ULD6 942 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 GSTTP1A0A1W2PQM5 241 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 DENND3A2RUS2 1198 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 TCP1P17987 556 aaKnown RBP17.12■□□□□ 0.33
RXRA-202ENST00000481739 SOX5P35711 763 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 RFC5P40937 340 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 FCGRTP55899 365 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 HTRA3P83110 453 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 PTK2Q05397 1052 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 IFI16Q16666 785 aaKnown RBP17.12■□□□□ 0.33
RXRA-202ENST00000481739 TMEM63BQ5T3F8 832 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 SOCS4Q8WXH5 440 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 FAM167AQ96KS9 214 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 CBWD1Q9BRT8 395 aa17.12■□□□□ 0.33
RXRA-202ENST00000481739 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.12■□□□□ 0.333e-6■■■□□ 16.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms