RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 DENND2AQ9ULE3 1009 aa5.08□□□□□ -1.6
COPA-204ENST00000481522 KIAA0556O60303 1618 aa5.08□□□□□ -1.6
COPA-204ENST00000481522 CEP170Q5SW79 1584 aa5.08□□□□□ -1.6
COPA-204ENST00000481522 ZEB2O60315 1214 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 BRINP1O60477 761 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 RAB11FIP3O75154 756 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 H2AFYO75367 372 aaKnown RBP5.07□□□□□ -1.6
COPA-204ENST00000481522 PRPF6O94906 941 aaKnown RBP5.07□□□□□ -1.6
COPA-204ENST00000481522 BPIP17213 487 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 CR2P20023 1033 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 LSP1P33241 339 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 PHC1P78364 1004 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 SMAD3P84022 425 aaKnown RBP5.07□□□□□ -1.6
COPA-204ENST00000481522 NFYCQ13952 458 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 DDB1Q16531 1140 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 ATP13A4Q4VNC1 1196 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 GPR158Q5T848 1215 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 KIAA1841Q6NSI8 718 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 ESPNLQ6ZVH7 1005 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 BMP8AQ7Z5Y6 402 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 TAX1BP1Q86VP1 789 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 AFAP1L2Q8N4X5 818 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 OR14K1Q8NGZ2 314 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 EXTL1Q92935 676 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 LPPQ93052 612 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 GFM2Q969S9 779 aaKnown RBP5.07□□□□□ -1.6
COPA-204ENST00000481522 ZG16BQ96DA0 208 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 DYDC2Q96IM9 177 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 SNX27Q96L92 541 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 DPYSL5Q9BPU6 564 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 MYL10Q9BUA6 226 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 MTG2Q9H4K7 406 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 EMC7Q9NPA0 242 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 MAGEL2Q9UJ55 1249 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 MSRAQ9UJ68 235 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 SYNPO2Q9UMS6 1093 aa5.07□□□□□ -1.6
COPA-204ENST00000481522 APOBEC2Q9Y235 224 aaKnown RBP5.07□□□□□ -1.6
COPA-204ENST00000481522 CDK12Q9NYV4 1490 aaPredicted RBP5.07□□□□□ -1.6
COPA-204ENST00000481522 RGS12O14924 1447 aa5.06□□□□□ -1.6
COPA-204ENST00000481522 ANKRD62A6NC57 917 aa5.06□□□□□ -1.6
COPA-204ENST00000481522 NEMP1O14524 444 aa5.06□□□□□ -1.6
COPA-204ENST00000481522 TGM5O43548 720 aa5.06□□□□□ -1.6
COPA-204ENST00000481522 ADAM15Q13444 863 aa5.06□□□□□ -1.6
COPA-204ENST00000481522 STRA8Q7Z7C7 330 aa5.06□□□□□ -1.6
COPA-204ENST00000481522 ZNF610Q8N9Z0 462 aa5.06□□□□□ -1.6
COPA-204ENST00000481522 NEU4Q8WWR8 484 aaPredicted RBP5.06□□□□□ -1.6
COPA-204ENST00000481522 GCDHQ92947 438 aaPredicted RBP5.06□□□□□ -1.6
COPA-204ENST00000481522 HIST1H2AHQ96KK5 128 aa5.06□□□□□ -1.6
COPA-204ENST00000481522 HIST1H2AJQ99878 128 aa5.06□□□□□ -1.6
COPA-204ENST00000481522 MSL2Q9HCI7 577 aa5.06□□□□□ -1.6
COPA-204ENST00000481522 KDM1AO60341 852 aa5.05□□□□□ -1.6
COPA-204ENST00000481522 COMTP21964 271 aa5.05□□□□□ -1.6
COPA-204ENST00000481522 TERF2Q15554 542 aa5.05□□□□□ -1.6
COPA-204ENST00000481522 TBR1Q16650 682 aa5.05□□□□□ -1.6
COPA-204ENST00000481522 BCL6BQ8N143 479 aaPredicted RBP5.05□□□□□ -1.6
COPA-204ENST00000481522 DNAJC5GQ8N7S2 189 aa5.05□□□□□ -1.6
COPA-204ENST00000481522 ZCRB1Q8TBF4 217 aaKnown RBP5.05□□□□□ -1.6
COPA-204ENST00000481522 SLC5A5Q92911 643 aa5.05□□□□□ -1.6
COPA-204ENST00000481522 SLC7A6OSQ96CW6 309 aaPredicted RBP5.05□□□□□ -1.6
COPA-204ENST00000481522 WDR92Q96MX6 357 aa5.05□□□□□ -1.6
COPA-204ENST00000481522 OR14A2Q96R54 314 aa5.05□□□□□ -1.6
COPA-204ENST00000481522 NOL10Q9BSC4 688 aaKnown RBP5.05□□□□□ -1.6
COPA-204ENST00000481522 PITHD1Q9GZP4 211 aaPredicted RBP5.05□□□□□ -1.6
COPA-204ENST00000481522 DNAI1Q9UI46 699 aa5.05□□□□□ -1.6
COPA-204ENST00000481522 MCM8Q9UJA3 840 aa5.05□□□□□ -1.6
COPA-204ENST00000481522 SLC26A4O43511 780 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 OPHN1O60890 802 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 ULK1O75385 1050 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 PCDH8O95206 1070 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 FBLP22087 321 aaKnown RBP5.04□□□□□ -1.6
COPA-204ENST00000481522 RPS19P39019 145 aaKnown RBP5.04□□□□□ -1.6
COPA-204ENST00000481522 DGCR2P98153 550 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 STAT4Q14765 748 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 BROXQ5VW32 411 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 FRMD7Q6ZUT3 714 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 KANSL1Q7Z3B3 1105 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 HDGFL2Q7Z4V5 671 aaPredicted RBP5.04□□□□□ -1.6
COPA-204ENST00000481522 CDYL2Q8N8U2 506 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 ATL2Q8NHH9 583 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 ZNF764Q96H86 408 aaPredicted RBP5.04□□□□□ -1.6
COPA-204ENST00000481522 NOC2LQ9Y3T9 749 aaKnown RBP5.04□□□□□ -1.6
COPA-204ENST00000481522 CTDP1Q9Y5B0 961 aaPredicted RBP5.04□□□□□ -1.6
COPA-204ENST00000481522 RBM8AQ9Y5S9 174 aaKnown RBP5.04□□□□□ -1.6
COPA-204ENST00000481522 SHANK2Q9UPX8 1470 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 GLI2P10070 1586 aa5.04□□□□□ -1.6
COPA-204ENST00000481522 CACNA1GO43497 2377 aa5.03□□□□□ -1.6
COPA-204ENST00000481522 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.03□□□□□ -1.6
COPA-204ENST00000481522 MATN2O00339 956 aa5.03□□□□□ -1.6
COPA-204ENST00000481522 PLSCR1O15162 318 aa5.03□□□□□ -1.6
COPA-204ENST00000481522 DAPK3O43293 454 aa5.03□□□□□ -1.6
COPA-204ENST00000481522 EYA4O95677 639 aa5.03□□□□□ -1.6
COPA-204ENST00000481522 NCLP19338 710 aaKnown RBP5.03□□□□□ -1.6
COPA-204ENST00000481522 ID4P47928 161 aa5.03□□□□□ -1.6
COPA-204ENST00000481522 SESN3P58005 492 aa5.03□□□□□ -1.6
COPA-204ENST00000481522 TCIRG1Q13488 830 aa5.03□□□□□ -1.6
COPA-204ENST00000481522 KRT40Q6A162 431 aa5.03□□□□□ -1.6
COPA-204ENST00000481522 UNQ6494/PRO21346Q6UXR6 183 aa5.03□□□□□ -1.6
COPA-204ENST00000481522 CXorf67Q86X51 503 aaPredicted RBP5.03□□□□□ -1.6
COPA-204ENST00000481522 SHCBP1Q8NEM2 672 aa5.03□□□□□ -1.6
COPA-204ENST00000481522 WDR66Q8TBY9 1149 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms