RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 CDCA2Q69YH5 1023 aaPredicted RBP18.84■□□□□ 0.61
HSPG2-209ENST00000480900 PDE12Q6L8Q7 609 aaKnown RBP18.84■□□□□ 0.61
HSPG2-209ENST00000480900 MMTAG2Q9BU76 263 aaKnown RBP18.84■□□□□ 0.61
HSPG2-209ENST00000480900 CSRNP2Q9H175 543 aa18.84■□□□□ 0.61
HSPG2-209ENST00000480900 TBC1D13Q9NVG8 400 aa18.84■□□□□ 0.61
HSPG2-209ENST00000480900 CLDND1Q9NY35 253 aa18.84■□□□□ 0.61
HSPG2-209ENST00000480900 PUF60Q9UHX1 559 aaKnown RBP18.84■□□□□ 0.61
HSPG2-209ENST00000480900 TRIP11Q15643 1979 aa18.83■□□□□ 0.61
HSPG2-209ENST00000480900 PP2D1A8MPX8 630 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 FSCN2O14926 492 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 EYA4O95677 639 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 ARF4P18085 180 aaPredicted RBP18.83■□□□□ 0.6
HSPG2-209ENST00000480900 PBX3P40426 434 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 KRT17Q04695 432 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 PPP2R5AQ15172 486 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 PPP4R3CPQ6ZMV5 832 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 AGMOQ6ZNB7 445 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 ZBTB8OSQ8IWT0 167 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 SLC39A11Q8N1S5 342 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 BSNDQ8WZ55 320 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 INTS4Q96HW7 963 aaKnown RBP18.83■□□□□ 0.6
HSPG2-209ENST00000480900 CPB2Q96IY4 423 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 PRIMPOLQ96LW4 560 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 C2orf40Q9H1Z8 148 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 RSAD1Q9HA92 442 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 DNM3Q9UQ16 869 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 INPP5FQ9Y2H2 1132 aa18.83■□□□□ 0.6
HSPG2-209ENST00000480900 TNFRSF10AO00220 468 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 BMP15O95972 392 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 CDC25AP30304 524 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 LTBRP36941 435 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 NAMPTP43490 491 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 ALDH7A1P49419 539 aaKnown RBP18.82■□□□□ 0.6
HSPG2-209ENST00000480900 BCAR1P56945 870 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 FAM187BQ17R55 369 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 PUS10Q3MIT2 529 aaKnown RBP18.82■□□□□ 0.6
HSPG2-209ENST00000480900 EP400NLQ6ZTU2 488 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 ADGRD2Q7Z7M1 963 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 SMG8Q8ND04 991 aaKnown RBP18.82■□□□□ 0.6
HSPG2-209ENST00000480900 URGCPQ8TCY9 931 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 MICAL1Q8TDZ2 1067 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 KIFAP3Q92845 792 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 UBN1Q9NPG3 1134 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 PRMT7Q9NVM4 692 aaPredicted RBP18.82■□□□□ 0.6
HSPG2-209ENST00000480900 KANSL3Q9P2N6 904 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 IPPQ9Y573 584 aa18.82■□□□□ 0.6
HSPG2-209ENST00000480900 MYH15Q9Y2K3 1946 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 A0A1B0GUA9 196 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 VPS37CA5D8V6 355 aaPredicted RBP18.81■□□□□ 0.6
HSPG2-209ENST00000480900 VWA3AA6NCI4 1184 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 H3BQ06 376 aaPredicted RBP18.81■□□□□ 0.6
HSPG2-209ENST00000480900 K7ELQ4 463 aaPredicted RBP18.81■□□□□ 0.6
HSPG2-209ENST00000480900 B4GALT5O43286 388 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 ZC3H11AO75152 810 aaKnown RBP eCLIP18.81■□□□□ 0.6
HSPG2-209ENST00000480900 ITGA4P13612 1032 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 GTF2F1P35269 517 aaKnown RBP eCLIP18.81■□□□□ 0.6
HSPG2-209ENST00000480900 ERVFC1P60507 584 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 RNASELQ05823 741 aaKnown RBP18.81■□□□□ 0.6
HSPG2-209ENST00000480900 ADAM15Q13444 863 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 HYIQ5T013 277 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 PTCRAQ6ISU1 281 aaPredicted RBP18.81■□□□□ 0.6
HSPG2-209ENST00000480900 KCTD17Q8N5Z5 321 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 EFHBQ8N7U6 833 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.81■□□□□ 0.6
HSPG2-209ENST00000480900 IFT74Q96LB3 600 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 NECAB3Q96P71 396 aaPredicted RBP18.81■□□□□ 0.6
HSPG2-209ENST00000480900 EIF2AQ9BY44 585 aaKnown RBP18.81■□□□□ 0.6
HSPG2-209ENST00000480900 FZD8Q9H461 694 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 IGFLR1Q9H665 355 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 NRDE2Q9H7Z3 1164 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 PCDHGC5Q9Y5F6 944 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 GTF3C3Q9Y5Q9 886 aa18.81■□□□□ 0.6
HSPG2-209ENST00000480900 FSD2A1L4K1 749 aa18.8■□□□□ 0.6
HSPG2-209ENST00000480900 E9PMD0 336 aa18.8■□□□□ 0.6
HSPG2-209ENST00000480900 INPPL1O15357 1258 aa18.8■□□□□ 0.6
HSPG2-209ENST00000480900 NRIP1P48552 1158 aa18.8■□□□□ 0.6
HSPG2-209ENST00000480900 MAPK6Q16659 721 aa18.8■□□□□ 0.6
HSPG2-209ENST00000480900 SLC27A1Q6PCB7 646 aa18.8■□□□□ 0.6
HSPG2-209ENST00000480900 HACE1Q8IYU2 909 aa18.8■□□□□ 0.6
HSPG2-209ENST00000480900 DEPTORQ8TB45 409 aa18.8■□□□□ 0.6
HSPG2-209ENST00000480900 CDCA3Q99618 268 aaPredicted RBP18.8■□□□□ 0.6
HSPG2-209ENST00000480900 TRIM6Q9C030 488 aaPredicted RBP18.8■□□□□ 0.6
HSPG2-209ENST00000480900 CCDC113Q9H0I3 377 aa18.8■□□□□ 0.6
HSPG2-209ENST00000480900 NT5C3AQ9H0P0 336 aa18.8■□□□□ 0.6
HSPG2-209ENST00000480900 TLE6Q9H808 572 aa18.8■□□□□ 0.6
HSPG2-209ENST00000480900 NGRNQ9NPE2 291 aaKnown RBP18.8■□□□□ 0.6
HSPG2-209ENST00000480900 ZMYM2Q9UBW7 1377 aa18.8■□□□□ 0.6
HSPG2-209ENST00000480900 GRXCR2A6NFK2 248 aa18.79■□□□□ 0.6
HSPG2-209ENST00000480900 SLC26A4O43511 780 aa18.79■□□□□ 0.6
HSPG2-209ENST00000480900 TBX10O75333 385 aa18.79■□□□□ 0.6
HSPG2-209ENST00000480900 EFNA5P52803 228 aa18.79■□□□□ 0.6
HSPG2-209ENST00000480900 KCNK18Q7Z418 384 aa18.79■□□□□ 0.6
HSPG2-209ENST00000480900 TMEM169Q96HH4 297 aa18.79■□□□□ 0.6
HSPG2-209ENST00000480900 AK8Q96MA6 479 aa18.79■□□□□ 0.6
HSPG2-209ENST00000480900 TCF25Q9BQ70 676 aa18.79■□□□□ 0.6
HSPG2-209ENST00000480900 ENTPD7Q9NQZ7 604 aa18.79■□□□□ 0.6
HSPG2-209ENST00000480900 FAM50BQ9Y247 325 aa18.79■□□□□ 0.6
HSPG2-209ENST00000480900 CITO14578 2027 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 NT5C1B-RDH14C9J2C7 533 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 N4BP3O15049 544 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms