RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PTGISQ16647 500 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 MAPK6Q16659 721 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 KIZQ2M2Z5 673 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 TCP11X2Q5H9J9 407 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 SARM1Q6SZW1 724 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 SLC43A3Q8NBI5 491 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 U2AF1L4Q8WU68 220 aaKnown RBP19.26■□□□□ 0.67
UPF3A-206ENST00000480362 TRIM5Q9C035 493 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 INO80BQ9C086 356 aaPredicted RBP19.26■□□□□ 0.67
UPF3A-206ENST00000480362 FZD8Q9H461 694 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 MINDY3Q9H8M7 445 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 DMAC2Q9NW81 257 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 SIP14410 1827 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 A0A0U1RQG5 324 aaPredicted RBP19.25■□□□□ 0.67
UPF3A-206ENST00000480362 GPR32O75388 356 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 SERPINC1P01008 464 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 PIGRP01833 764 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 EDN1P05305 212 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 EEF1GP26641 437 aaKnown RBP19.25■□□□□ 0.67
UPF3A-206ENST00000480362 LIG4P49917 911 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 CYP2J2P51589 502 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 MBTD1Q05BQ5 628 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 MYBPC2Q14324 1141 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 ARMCX5Q6P1M9 558 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 SLC39A4Q6P5W5 647 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 SRGAP1Q7Z6B7 1085 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 SERINC5Q86VE9 423 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 C12orf56Q8IXR9 622 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 CNOT6LQ96LI5 555 aaKnown RBP19.25■□□□□ 0.67
UPF3A-206ENST00000480362 CTAGE1Q96RT6 745 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 TARS2Q9BW92 718 aaKnown RBP19.25■□□□□ 0.67
UPF3A-206ENST00000480362 CRISPLD2Q9H0B8 497 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 PCIF1Q9H4Z3 704 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 CDHR5Q9HBB8 845 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 IFNKQ9P0W0 207 aa19.25■□□□□ 0.67
UPF3A-206ENST00000480362 LIMA1Q9UHB6 759 aaKnown RBP19.25■□□□□ 0.67
UPF3A-206ENST00000480362 ARVCFO00192 962 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 ACKR2O00590 384 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 HNRNPDLO14979 420 aaKnown RBP19.24■□□□□ 0.67
UPF3A-206ENST00000480362 CSDE1O75534 798 aaKnown RBP19.24■□□□□ 0.67
UPF3A-206ENST00000480362 ADCY5O95622 1261 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 GNA14O95837 355 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 KRT31Q15323 416 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 CCDC40Q4G0X9 1142 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 CEP135Q66GS9 1140 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 RSPH3Q86UC2 560 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 SLC9A9Q8IVB4 645 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 ANKRD20A12PQ8NF67 263 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 ANP32BQ92688 251 aaKnown RBP19.24■□□□□ 0.67
UPF3A-206ENST00000480362 CBWD1Q9BRT8 395 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 MRPL4Q9BYD3 311 aaKnown RBP19.24■□□□□ 0.67
UPF3A-206ENST00000480362 GCOM2Q9BZD3 368 aaPredicted RBP19.24■□□□□ 0.67
UPF3A-206ENST00000480362 PRDM10Q9NQV6 1147 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 TRMT13Q9NUP7 481 aaKnown RBP19.24■□□□□ 0.67
UPF3A-206ENST00000480362 PRMT7Q9NVM4 692 aaPredicted RBP19.24■□□□□ 0.67
UPF3A-206ENST00000480362 GINS2Q9Y248 185 aa19.24■□□□□ 0.67
UPF3A-206ENST00000480362 LRRC10BA6NIK2 292 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 TTLL13PA6NNM8 815 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 AKAP3O75969 853 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 IQCF3P0C7M6 154 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 ADSSP30520 456 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 MTIF2P46199 727 aaKnown RBP19.23■□□□□ 0.67
UPF3A-206ENST00000480362 CASP4P49662 377 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 ZNF75DP51815 510 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 UBASH3AP57075 661 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 PRPF4BQ13523 1007 aaKnown RBP19.23■□□□□ 0.67
UPF3A-206ENST00000480362 FAM187BQ17R55 369 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 ZPBP2Q6X784 338 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 APTXQ7Z2E3 356 aaKnown RBP19.23■□□□□ 0.67
UPF3A-206ENST00000480362 ZNF710Q8N1W2 664 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 TMEM174Q8WUU8 243 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 POMGNT1Q8WZA1 660 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 WNT8BQ93098 351 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 OSMRQ99650 979 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 TAB2Q9NYJ8 693 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 HSPBP1Q9NZL4 362 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 NOD1Q9Y239 953 aa19.23■□□□□ 0.67
UPF3A-206ENST00000480362 EXOC3O60645 756 aa19.22■□□□□ 0.67
UPF3A-206ENST00000480362 RPLP2P05387 115 aaKnown RBP19.22■□□□□ 0.67
UPF3A-206ENST00000480362 GARTP22102 1010 aa19.22■□□□□ 0.67
UPF3A-206ENST00000480362 COPB1P53618 953 aaKnown RBP19.22■□□□□ 0.67
UPF3A-206ENST00000480362 MRPS6P82932 125 aaKnown RBP19.22■□□□□ 0.67
UPF3A-206ENST00000480362 PTK7Q13308 1070 aa19.22■□□□□ 0.67
UPF3A-206ENST00000480362 SLFN12LQ6IEE8 588 aa19.22■□□□□ 0.67
UPF3A-206ENST00000480362 RPAINQ86UA6 219 aa19.22■□□□□ 0.67
UPF3A-206ENST00000480362 XXYLT1Q8NBI6 393 aa19.22■□□□□ 0.67
UPF3A-206ENST00000480362 ZBTB45Q96K62 511 aaPredicted RBP19.22■□□□□ 0.67
UPF3A-206ENST00000480362 NAP1L5Q96NT1 182 aaPredicted RBP19.22■□□□□ 0.67
UPF3A-206ENST00000480362 ACO2Q99798 780 aaKnown RBP19.22■□□□□ 0.67
UPF3A-206ENST00000480362 TUBGCP2Q9BSJ2 902 aa19.22■□□□□ 0.67
UPF3A-206ENST00000480362 SEZ6LQ9BYH1 1024 aa19.22■□□□□ 0.67
UPF3A-206ENST00000480362 CELF4Q9BZC1 486 aaKnown RBP19.22■□□□□ 0.67
UPF3A-206ENST00000480362 XPO4Q9C0E2 1151 aaKnown RBP19.22■□□□□ 0.67
UPF3A-206ENST00000480362 SENP6Q9GZR1 1112 aaPredicted RBP19.22■□□□□ 0.67
UPF3A-206ENST00000480362 VPS16Q9H269 839 aa19.22■□□□□ 0.67
UPF3A-206ENST00000480362 FRMD4BQ9Y2L6 1034 aa19.22■□□□□ 0.67
UPF3A-206ENST00000480362 STYXL1Q9Y6J8 313 aa19.22■□□□□ 0.67
UPF3A-206ENST00000480362 M0QZ92 97 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 SLC16A3O15427 465 aaKnown RBP19.21■□□□□ 0.67
UPF3A-206ENST00000480362 B4GALT5O43286 388 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms