RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 SLC40A1Q9NP59 571 aa9.38□□□□□ -0.91
PKP4-210ENST00000480171 ZDHHC18Q9NUE0 388 aa9.38□□□□□ -0.91
PKP4-210ENST00000480171 CTDP1Q9Y5B0 961 aaPredicted RBP9.38□□□□□ -0.91
PKP4-210ENST00000480171 LRRC37AA6NMS7 1700 aa9.38□□□□□ -0.91
PKP4-210ENST00000480171 RGS16O15492 202 aaPredicted RBP9.37□□□□□ -0.91
PKP4-210ENST00000480171 CHMP2AO43633 222 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 CTNND1O60716 968 aaKnown RBP9.37□□□□□ -0.91
PKP4-210ENST00000480171 GAS7O60861 476 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 TRIM49P0CI25 452 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 TRIM49CP0CI26 452 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 RBM5P52756 815 aaKnown RBP eCLIP9.37□□□□□ -0.91
PKP4-210ENST00000480171 ADCY2Q08462 1091 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 BFSP1Q12934 665 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 PPP2R5CQ13362 524 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 ZNF211Q13398 564 aaPredicted RBP9.37□□□□□ -0.91
PKP4-210ENST00000480171 QPCTQ16769 361 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 CBWD6Q4V339 395 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 LACTB2Q53H82 288 aaPredicted RBP9.37□□□□□ -0.91
PKP4-210ENST00000480171 CBWD3Q5JTY5 395 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 CBWD5Q5RIA9 395 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 C6orf118Q5T5N4 469 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 ERMARDQ5T6L9 678 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 DCAF12L1Q5VU92 463 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 BTNL9Q6UXG8 535 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 SLC9A9Q8IVB4 645 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 CYP2W1Q8TAV3 490 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 MYCBPQ99417 103 aaPredicted RBP9.37□□□□□ -0.91
PKP4-210ENST00000480171 SELENOSQ9BQE4 189 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 MRIQ9BWK5 157 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 IDI2Q9BXS1 227 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 WDR11Q9BZH6 1224 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 FAM129AQ9BZQ8 928 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 MTUS1Q9ULD2 1270 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 IGSF9BQ9UPX0 1349 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 SNX24Q9Y343 169 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 ALG6Q9Y672 507 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 LTBP1Q14766 1721 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 IGLV3-22A0A075B6J6 115 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 TLDC2A0PJX2 215 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 DDTLA6NHG4 134 aaPredicted RBP9.37□□□□□ -0.91
PKP4-210ENST00000480171 CAND2O75155 1236 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 RASSF9O75901 435 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 SLURP2P0DP57 97 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 GHRP10912 638 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 DRD4P21917 467 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 ZNF131P52739 623 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 GPC5P78333 572 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 PPARDQ03181 441 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 COG2Q14746 738 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
PKP4-210ENST00000480171 ANKRD20A8PQ5CZ79 823 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 SIAH1Q8IUQ4 282 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 CCDC197Q8NCU1 140 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 OLIG1Q8TAK6 271 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 CXorf38Q8TB03 319 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 GPR88Q9GZN0 384 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 BCAS3Q9H6U6 928 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 GEMIN8Q9NWZ8 242 aaKnown RBP9.37□□□□□ -0.91
PKP4-210ENST00000480171 CNOT7Q9UIV1 285 aaKnown RBP9.37□□□□□ -0.91
PKP4-210ENST00000480171 NR2E1Q9Y466 385 aa9.37□□□□□ -0.91
PKP4-210ENST00000480171 ARHGEF35A5YM69 484 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 DCDC2CA8MYV0 355 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 FOXN3O00409 490 aaPredicted RBP9.36□□□□□ -0.91
PKP4-210ENST00000480171 KIAA0391O15091 583 aaKnown RBP9.36□□□□□ -0.91
PKP4-210ENST00000480171 P4HA2O15460 535 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 PSMD10O75832 226 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 AGTP01019 485 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 VCAM1P19320 739 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 CACNB3P54284 484 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 SLMAPQ14BN4 828 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 TCEAL1Q15170 157 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 NBPF9Q3BBW0 867 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 SREK1Q8WXA9 508 aaKnown RBP9.36□□□□□ -0.91
PKP4-210ENST00000480171 GLG1Q92896 1179 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 SLC5A5Q92911 643 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 RPS6KC1Q96S38 1066 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 ERVK-5Q9HDB9 667 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 UBE2TQ9NPD8 197 aaPredicted RBP9.36□□□□□ -0.91
PKP4-210ENST00000480171 TMEM110-MUSTN1A8MSY1 372 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 PHF20L1A8MW92 1017 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 POLRMTO00411 1230 aaKnown RBP9.36□□□□□ -0.91
PKP4-210ENST00000480171 LRRN2O75325 713 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 GDF11O95390 407 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 CFBP00751 764 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 FTLP02792 175 aaPredicted RBP9.36□□□□□ -0.91
PKP4-210ENST00000480171 MMEP08473 750 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 POLR2MP0CAP2 368 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 MAP2K2P36507 400 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 ALCAMQ13740 583 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 SNCBQ16143 134 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 INTS8Q75QN2 995 aaKnown RBP9.36□□□□□ -0.91
PKP4-210ENST00000480171 RPAINQ86UA6 219 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 COL23A1Q86Y22 540 aaPredicted RBP9.36□□□□□ -0.91
PKP4-210ENST00000480171 KSR1Q8IVT5 923 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 ALG3Q92685 438 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 ZSWIM1Q9BR11 485 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 TACO1Q9BSH4 297 aaKnown RBP9.36□□□□□ -0.91
PKP4-210ENST00000480171 OSBPL7Q9BZF2 842 aa9.36□□□□□ -0.91
PKP4-210ENST00000480171 NSRP1Q9H0G5 558 aaKnown RBP9.36□□□□□ -0.91
PKP4-210ENST00000480171 WNT8AQ9H1J5 351 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms