RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 MYO1AQ9UBC5 1043 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 TMEM88BA6NKF7 163 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 ANKRD63C9JTQ0 380 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 K7ERI5 159 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 HNRNPDLO14979 420 aaKnown RBP12□□□□□ -0.49
VTI1A-204ENST00000480057 CA12O43570 354 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 EXTL3O43909 919 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 LDHAP00338 332 aaKnown RBP12□□□□□ -0.49
VTI1A-204ENST00000480057 IGHA2P01877 340 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 SERPING1P05155 500 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 UCHL3P15374 230 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 ADCYAP1R1P41586 468 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 LIG4P49917 911 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 SOX10P56693 466 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 MYL7Q01449 175 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 CAPSQ13938 189 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 SNRNP35Q16560 246 aaKnown RBP12□□□□□ -0.49
VTI1A-204ENST00000480057 SLC9C1Q4G0N8 1177 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 SFMBT2Q5VUG0 894 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 SLC39A4Q6P5W5 647 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 TRIM65Q6PJ69 517 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 TAS1R3Q7RTX0 852 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 ZBTB8OSQ8IWT0 167 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 GPD1LQ8N335 351 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 CCDC155Q8N6L0 562 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 CCDC42Q96M95 316 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 APBA2Q99767 749 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 KIFC3Q9BVG8 833 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 NFKBIZQ9BYH8 718 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 HAUS4Q9H6D7 363 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 NHEJ1Q9H9Q4 299 aaPredicted RBP12□□□□□ -0.49
VTI1A-204ENST00000480057 GPBP1L1Q9HC44 474 aaPredicted RBP12□□□□□ -0.49
VTI1A-204ENST00000480057 GCNT4Q9P109 453 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 TRPC6Q9Y210 931 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 Q9Y3F1 56 aa12□□□□□ -0.49
VTI1A-204ENST00000480057 BZW2Q9Y6E2 419 aaKnown RBP12□□□□□ -0.49
VTI1A-204ENST00000480057 LRRIQ4A6NIV6 560 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 KIF3CO14782 793 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 MMP3P08254 477 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 SMPD1P17405 629 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 SLC9A1P19634 815 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 MARK3P27448 753 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 PRKCIP41743 596 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 POLR2FP61218 127 aaKnown RBP11.99□□□□□ -0.49
VTI1A-204ENST00000480057 DGKDQ16760 1214 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 SMYD5Q6GMV2 418 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 TRIM50Q86XT4 487 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 IFNLR1Q8IU57 520 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-204ENST00000480057 OR6J1Q8NGC5 347 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 AFG1LQ8WV93 481 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 PRPF31Q8WWY3 499 aaKnown RBP11.99□□□□□ -0.49
VTI1A-204ENST00000480057 POMGNT1Q8WZA1 660 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 BICD1Q96G01 975 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 C16orf70Q9BSU1 422 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 CRACR2AQ9BSW2 395 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 DESI2Q9BSY9 194 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 TSGA10Q9BZW7 698 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 CCDC113Q9H0I3 377 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 PCIF1Q9H4Z3 704 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 SIX2Q9NPC8 291 aa11.99□□□□□ -0.49
VTI1A-204ENST00000480057 ZHX1Q9UKY1 873 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-204ENST00000480057 R3HCC1Q9Y3T6 440 aaKnown RBP11.99□□□□□ -0.49
VTI1A-204ENST00000480057 ZSWIM8A7E2V4 1837 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 ATP8B3O60423 1300 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 ZNF233A6NK53 670 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 TISP43B9A030 160 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 RBAK-RBAKDNI3L0D1 243 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 KIF5CO60282 957 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 GFPT2O94808 682 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 C22orf31O95567 290 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 CCDC172P0C7W6 258 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 JAM2P57087 298 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 CLDN10P78369 228 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 TNFAIP2Q03169 654 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 CYP24A1Q07973 514 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 LAMTOR4Q0VGL1 99 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 MKRN4PQ13434 485 aaPredicted RBP11.98□□□□□ -0.49
VTI1A-204ENST00000480057 SPA17Q15506 151 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 ASIC2Q16515 512 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 ASTE1Q2TB18 679 aaPredicted RBP11.98□□□□□ -0.49
VTI1A-204ENST00000480057 HGSNATQ68CP4 663 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 LINC01465Q8N7H1 131 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 EHBP1Q8NDI1 1231 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 SPAG5Q96R06 1193 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 MRPL4Q9BYD3 311 aaKnown RBP11.98□□□□□ -0.49
VTI1A-204ENST00000480057 STK33Q9BYT3 514 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 INTS2Q9H0H0 1204 aaKnown RBP11.98□□□□□ -0.49
VTI1A-204ENST00000480057 TMEM8AQ9HCN3 771 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 NLRC4Q9NPP4 1024 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 LUC7LQ9NQ29 371 aaKnown RBP11.98□□□□□ -0.49
VTI1A-204ENST00000480057 ARHGAP20Q9P2F6 1191 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 SUCLA2Q9P2R7 463 aaPredicted RBP11.98□□□□□ -0.49
VTI1A-204ENST00000480057 GJD2Q9UKL4 321 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 ABT1Q9ULW3 272 aaKnown RBP11.98□□□□□ -0.49
VTI1A-204ENST00000480057 GNEQ9Y223 722 aaKnown RBP11.98□□□□□ -0.49
VTI1A-204ENST00000480057 COQ4Q9Y3A0 265 aa11.98□□□□□ -0.49
VTI1A-204ENST00000480057 A0A0B4J269 797 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.97□□□□□ -0.49
VTI1A-204ENST00000480057 RRN3P2A6NIE6 340 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 A6NJR5 290 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms