RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 HAPLN2Q9GZV7 340 aa7.36□□□□□ -1.23
COMMD3-212ENST00000479958 AGO3Q9H9G7 860 aaKnown RBP7.36□□□□□ -1.23
COMMD3-212ENST00000479958 MSRAQ9UJ68 235 aa7.36□□□□□ -1.23
COMMD3-212ENST00000479958 RCAN3Q9UKA8 241 aa7.36□□□□□ -1.23
COMMD3-212ENST00000479958 MYPNQ86TC9 1320 aa7.36□□□□□ -1.23
COMMD3-212ENST00000479958 KDM5BQ9UGL1 1544 aa7.36□□□□□ -1.23
COMMD3-212ENST00000479958 CDC42BPAQ5VT25 1732 aa7.36□□□□□ -1.23
COMMD3-212ENST00000479958 KDM6BO15054 1643 aa7.36□□□□□ -1.23
COMMD3-212ENST00000479958 NAIPQ13075 1403 aa7.36□□□□□ -1.23
COMMD3-212ENST00000479958 CAMSAP2Q08AD1 1489 aa7.36□□□□□ -1.23
COMMD3-212ENST00000479958 TLDC2A0PJX2 215 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 OPHN1O60890 802 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 FZD7O75084 574 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 FKBP9O95302 570 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 FSHBP01225 129 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 VSIG10L2P0DP72 767 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 C6P13671 934 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 TACR2P21452 398 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 GDF5P43026 501 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 PHC1P78364 1004 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 FOXE3Q13461 319 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 FKBP9P1Q75LS8 142 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 ZNF808Q8N4W9 903 aaPredicted RBP7.35□□□□□ -1.23
COMMD3-212ENST00000479958 UIMC1Q96RL1 719 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 ZNF341Q9BYN7 854 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 C14orf93Q9H972 538 aaKnown RBP7.35□□□□□ -1.23
COMMD3-212ENST00000479958 TLR9Q9NR96 1032 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 MAPRE3Q9UPY8 281 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 GIT1Q9Y2X7 761 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 DAPK1P53355 1430 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.35□□□□□ -1.23
COMMD3-212ENST00000479958 TGM5O43548 720 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 CLSTN1O94985 981 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 XPAP23025 273 aaPredicted RBP7.35□□□□□ -1.23
COMMD3-212ENST00000479958 HNRNPMP52272 730 aaKnown RBP eCLIP7.35□□□□□ -1.23
COMMD3-212ENST00000479958 GYS2P54840 703 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 FAM111BQ6SJ93 734 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 UNQ6494/PRO21346Q6UXR6 183 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 RNF207Q6ZRF8 634 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 FRMD7Q6ZUT3 714 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 GAREM2Q75VX8 874 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 C1orf210Q8IVY1 113 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 GSPT2Q8IYD1 628 aaKnown RBP7.35□□□□□ -1.23
COMMD3-212ENST00000479958 TCF25Q9BQ70 676 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 SPTLC3Q9NUV7 552 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 SRRDQ9UH36 339 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 TBX22Q9Y458 520 aa7.35□□□□□ -1.23
COMMD3-212ENST00000479958 TTC37Q6PGP7 1564 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 UBE2QL1A1L167 161 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 CAPN14A8MX76 684 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 TOX4O94842 621 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 PCDH8O95206 1070 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 ACRV1P26436 265 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 STAT3P40763 770 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 KIR2DL3P43628 341 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 ACAP1Q15027 740 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 CRIP3Q6Q6R5 217 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 DDX46Q7L014 1031 aaKnown RBP7.34□□□□□ -1.23
COMMD3-212ENST00000479958 EXTL1Q92935 676 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 USP7Q93009 1102 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 ZNF496Q96IT1 587 aaPredicted RBP7.34□□□□□ -1.23
COMMD3-212ENST00000479958 GPHA2Q96T91 129 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 CSRNP2Q9H175 543 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 TMA7Q9Y2S6 64 aaKnown RBP7.34□□□□□ -1.23
COMMD3-212ENST00000479958 PCDHB6Q9Y5E3 794 aa7.34□□□□□ -1.23
COMMD3-212ENST00000479958 HFM1A2PYH4 1435 aa7.33□□□□□ -1.24
COMMD3-212ENST00000479958 GSG1L2A8MUP6 293 aa7.33□□□□□ -1.24
COMMD3-212ENST00000479958 NRP2O60462 931 aa7.33□□□□□ -1.24
COMMD3-212ENST00000479958 PDE8AO60658 829 aa7.33□□□□□ -1.24
COMMD3-212ENST00000479958 HNRNPLP14866 589 aaKnown RBP eCLIP7.33□□□□□ -1.24
COMMD3-212ENST00000479958 TERF2Q15554 542 aa7.33□□□□□ -1.24
COMMD3-212ENST00000479958 SEPT7Q16181 437 aaKnown RBP7.33□□□□□ -1.24
COMMD3-212ENST00000479958 CDYL2Q8N8U2 506 aa7.33□□□□□ -1.24
COMMD3-212ENST00000479958 RSAD2Q8WXG1 361 aa7.33□□□□□ -1.24
COMMD3-212ENST00000479958 ARL8AQ96BM9 186 aa7.33□□□□□ -1.24
COMMD3-212ENST00000479958 WNT8AQ9H1J5 351 aa7.33□□□□□ -1.24
COMMD3-212ENST00000479958 IL23AQ9NPF7 189 aa7.33□□□□□ -1.24
COMMD3-212ENST00000479958 CDC42BPBQ9Y5S2 1711 aa7.33□□□□□ -1.24
COMMD3-212ENST00000479958 MAPKBP1O60336 1514 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 DNMT1P26358 1616 aaKnown RBP7.32□□□□□ -1.24
COMMD3-212ENST00000479958 A0A087X0B3 334 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 ELL2O00472 640 aaPredicted RBP7.32□□□□□ -1.24
COMMD3-212ENST00000479958 ADCYAP1R1P41586 468 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 GPR15P49685 360 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 NPEPPSP55786 919 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 SAFB2Q14151 953 aaKnown RBP eCLIP7.32□□□□□ -1.24
COMMD3-212ENST00000479958 MFSD5Q6N075 450 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 CMTM4Q8IZR5 234 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 MIEF2Q96C03 454 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 SIN3AQ96ST3 1273 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 NCDNQ9UBB6 729 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 USP18Q9UMW8 372 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 SH3BP1Q9Y3L3 701 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 NOC2LQ9Y3T9 749 aaKnown RBP7.32□□□□□ -1.24
COMMD3-212ENST00000479958 AKNAQ7Z591 1439 aa7.32□□□□□ -1.24
COMMD3-212ENST00000479958 ITSN2Q9NZM3 1697 aa7.31□□□□□ -1.24
COMMD3-212ENST00000479958 MFAP3LO75121 409 aa7.31□□□□□ -1.24
COMMD3-212ENST00000479958 HSD3B2P26439 372 aa7.31□□□□□ -1.24
COMMD3-212ENST00000479958 NRG3P56975 720 aa7.31□□□□□ -1.24
COMMD3-212ENST00000479958 CRHR2Q13324 411 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms