RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 IQCF3P0C7M6 154 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 CD44P16070 742 aaKnown RBP13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 HOXD13P35453 343 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 STRN3Q13033 797 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 KNOP1Q1ED39 458 aaKnown RBP13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 ZCWPW2Q504Y3 356 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 LRSAM1Q6UWE0 723 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 ZPBP2Q6X784 338 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 TSHZ1Q6ZSZ6 1077 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 TMEM174Q8WUU8 243 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 DHTKD1Q96HY7 919 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 PPP1R16BQ96T49 567 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 HTATIP2Q9BUP3 242 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 KCTD10Q9H3F6 313 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 CDHR5Q9HBB8 845 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 CGNQ9P2M7 1197 aaKnown RBP13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 PDXKO00764 312 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 EDN1P05305 212 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 CCNE1P24864 410 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 ERCC5P28715 1186 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 AXLP30530 894 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 LRRC63Q05C16 580 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 KCNA1Q09470 495 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 PAK1Q13153 545 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 MBTPS1Q14703 1052 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 NFIL3Q16649 462 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 ISM2Q6H9L7 571 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 CENPPQ6IPU0 288 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 FAM228AQ86W67 206 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 C12orf56Q8IXR9 622 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 ZNF668Q96K58 619 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 BPIFA3Q9BQP9 254 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 MRPL4Q9BYD3 311 aaKnown RBP13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 GBP3Q9H0R5 595 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 WNT8AQ9H1J5 351 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 AGPAT5Q9NUQ2 364 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 TMEM39AQ9NV64 488 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 TYW1Q9NV66 732 aaKnown RBP13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 TRAF3IP3Q9Y228 551 aa13.77□□□□□ -0.21
TRAPPC12-218ENST00000479897 RALGAPA2Q2PPJ7 1873 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 UMODL1Q5DID0 1318 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 CCDC85CA6NKD9 419 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 HNRNPDLO14979 420 aaKnown RBP13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 TGFB1I1O43294 461 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 TSPAN1O60635 241 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 RPS6KA5O75582 802 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 ERLIN2O94905 339 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 CXCL10P02778 98 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 PROZP22891 400 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 RFC2P35250 354 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 LPIN1Q14693 890 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 EDRF1Q3B7T1 1238 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 C11orf57Q6ZUT1 292 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 GOLGA5Q8TBA6 731 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 P2RX5Q93086 422 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 CCDC51Q96ER9 411 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 GZF1Q9H116 711 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 ERVK-5Q9HDB9 667 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 RWDD2AQ9UIY3 292 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 GINS2Q9Y248 185 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 NOC2LQ9Y3T9 749 aaKnown RBP13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 STYXL1Q9Y6J8 313 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 TET1Q8NFU7 2136 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 MICAL3Q7RTP6 2002 aa13.76□□□□□ -0.21
TRAPPC12-218ENST00000479897 MKI67P46013 3256 aaKnown RBP13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 BICDL2A1A5D9 508 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 TRIM43BA6NCK2 446 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 ABLIM1O14639 778 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 GPR182O15218 404 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 TOM1L1O75674 476 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 TIMP1P01033 207 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 GHRP10912 638 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 ARF4P18085 180 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 PRPF4BQ13523 1007 aaKnown RBP13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 MYBPC2Q14324 1141 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 ANO6Q4KMQ2 910 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 SLC39A4Q6P5W5 647 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 HS2ST1Q7LGA3 356 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 CATSPER4Q7RTX7 472 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 NELFCDQ8IXH7 590 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 ZC3H3Q8IXZ2 948 aaKnown RBP13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 TRIM43Q96BQ3 446 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 ACO2Q99798 780 aaKnown RBP13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 NAT10Q9H0A0 1025 aaKnown RBP13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 DNAJC25Q9H1X3 360 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 SEMA6BQ9H3T3 888 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 AGO3Q9H9G7 860 aaKnown RBP13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 PTPRHQ9HD43 1115 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 CHST12Q9NRB3 414 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 CTNND2Q9UQB3 1225 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 MAPK8IP1Q9UQF2 711 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 TNFSF13BQ9Y275 285 aa13.75□□□□□ -0.21
TRAPPC12-218ENST00000479897 A0A1B0GUA9 196 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 N4BP3O15049 544 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 KIAA0391O15091 583 aaKnown RBP13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 B4GALT5O43286 388 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 NBNO60934 754 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 CSDE1O75534 798 aaKnown RBP13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 GARTP22102 1010 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 HOXA11P31270 313 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms