RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ALDH7A1P49419 539 aaKnown RBP19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 ANKRD54Q6NXT1 300 aa19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 SYCE2Q6PIF2 218 aa19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 SRGAP1Q7Z6B7 1085 aa19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 C12orf76Q8N812 135 aaPredicted RBP19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 SMG8Q8ND04 991 aaKnown RBP19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 TCP11Q8WWU5 503 aa19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 TMEM169Q96HH4 297 aa19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 CCDC43Q96MW1 224 aaKnown RBP19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 VN1R3Q9BXE9 311 aa19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 POLR3FQ9H1D9 316 aaPredicted RBP19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 USP20Q9Y2K6 914 aa19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.35■□□□□ 0.69
ECHDC1-216ENST00000479525 TSPAN1O60635 241 aa19.35■□□□□ 0.69
ECHDC1-216ENST00000479525 ERLIN2O94905 339 aa19.35■□□□□ 0.69
ECHDC1-216ENST00000479525 GALTP07902 379 aa19.35■□□□□ 0.69
ECHDC1-216ENST00000479525 GLRA2P23416 452 aa19.35■□□□□ 0.69
ECHDC1-216ENST00000479525 RARRES1P49788 294 aa19.35■□□□□ 0.69
ECHDC1-216ENST00000479525 KCNC3Q14003 757 aa19.35■□□□□ 0.69
ECHDC1-216ENST00000479525 SMC1AQ14683 1233 aaKnown RBP19.35■□□□□ 0.69
ECHDC1-216ENST00000479525 POTEGQ6S5H5 508 aa19.35■□□□□ 0.69
ECHDC1-216ENST00000479525 ZBP1Q9H171 429 aa19.35■□□□□ 0.69
ECHDC1-216ENST00000479525 RSAD1Q9HA92 442 aa19.35■□□□□ 0.69
ECHDC1-216ENST00000479525 HCFC2Q9Y5Z7 792 aa19.35■□□□□ 0.69
ECHDC1-216ENST00000479525 F8W810 466 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 CLASP2O75122 1294 aaKnown RBP19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 CENPBP07199 599 aaPredicted RBP19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 SPATA31C1P0DKV0 1188 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 MYBP10242 640 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 ALADP13716 330 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 RAB27AP51159 221 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 PTENP60484 403 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 SAFBQ15424 915 aaKnown RBP eCLIP19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 IGSF21Q96ID5 467 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 NGRNQ9NPE2 291 aaKnown RBP19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 MIOSQ9NXC5 875 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 CACNG4Q9UBN1 327 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 PRG3Q9Y2Y8 225 aaPredicted RBP19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 IPPQ9Y573 584 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 TRIP11Q15643 1979 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 WDFY4Q6ZS81 3184 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 TECTAO75443 2155 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 MYO10Q9HD67 2058 aa19.34■□□□□ 0.69
ECHDC1-216ENST00000479525 ZNF623O75123 536 aa19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 EPCAMP16422 314 aa19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 MBTD1Q05BQ5 628 aa19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 PDE12Q6L8Q7 609 aaKnown RBP19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 FAM43BQ6ZT52 329 aaPredicted RBP19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 CATSPER3Q86XQ3 398 aa19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 MRPL43Q8N983 215 aaKnown RBP19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 RABGGTAQ92696 567 aa19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 ZFP42Q96MM3 310 aa19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 POP1Q99575 1024 aaKnown RBP19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 CDCA3Q99618 268 aaPredicted RBP19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 TRAIPQ9BWF2 469 aa19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 S1PR5Q9H228 398 aa19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 NXF3Q9H4D5 531 aaKnown RBP19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 TSHZ2Q9NRE2 1034 aa19.33■□□□□ 0.69
ECHDC1-216ENST00000479525 LRRIQ4A6NIV6 560 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 SKIP12755 728 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 ARF4P18085 180 aaPredicted RBP19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 LIG1P18858 919 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 ARL2P36404 184 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 MLH1P40692 756 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 AMHR2Q16671 573 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 RARS2Q5T160 578 aaKnown RBP19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 URGCPQ8TCY9 931 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 SUSD6Q92537 303 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 PGBD4Q96DM1 585 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 GAD1Q99259 594 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 ANKEF1Q9NU02 776 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 KLK14Q9P0G3 267 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 HCN4Q9Y3Q4 1203 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 TTLL13PA6NNM8 815 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 PRR33A8MZF0 331 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 LOC730098B7Z3J9 87 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 C2CD2LO14523 706 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 GAS2O43903 313 aaKnown RBP19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 DGAT1O75907 488 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 LYPLA2O95372 231 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 NPTXRO95502 500 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 OR52Z1P0C646 297 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 ITGA4P13612 1032 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 AKAP5P24588 427 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 SCNN1GP51170 649 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 GNL2Q13823 731 aaKnown RBP19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 ECM1Q16610 540 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 TTC38Q5R3I4 469 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 HFE2Q6ZVN8 426 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 MRPL10Q7Z7H8 261 aaKnown RBP19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 EXOC8Q8IYI6 725 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 FAM184AQ8NB25 1140 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 BSNDQ8WZ55 320 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 FAM193BQ96PV7 902 aaPredicted RBP19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 PHF7Q9BWX1 381 aaPredicted RBP19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 PPME1Q9Y570 386 aa19.32■□□□□ 0.68
ECHDC1-216ENST00000479525 NRP1O14786 923 aa19.31■□□□□ 0.68
ECHDC1-216ENST00000479525 ASAP2O43150 1006 aa19.31■□□□□ 0.68
ECHDC1-216ENST00000479525 NCLP19338 710 aaKnown RBP19.31■□□□□ 0.68
ECHDC1-216ENST00000479525 TFDP1Q14186 410 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms