RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 REEP2Q9BRK0 252 aa22.59■■□□□ 1.21
VARS-224ENST00000479051 PYM1Q9BRP8 204 aaKnown RBP22.59■■□□□ 1.21
VARS-224ENST00000479051 KIFC3Q9BVG8 833 aa22.59■■□□□ 1.21
VARS-224ENST00000479051 TRIM6Q9C030 488 aaPredicted RBP22.59■■□□□ 1.21
VARS-224ENST00000479051 CUEDC2Q9H467 287 aa22.59■■□□□ 1.21
VARS-224ENST00000479051 CIZ1Q9ULV3 898 aaPredicted RBP22.59■■□□□ 1.21
VARS-224ENST00000479051 CNTNAP2Q9UHC6 1331 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 NPHP3-ACAD11A0A0J9YXS1 232 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 TBKBP1A7MCY6 615 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 K7ERI5 159 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 ZNF623O75123 536 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 ARF4P18085 180 aaPredicted RBP22.58■■□□□ 1.21
VARS-224ENST00000479051 ERVK-21P61565 698 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 AMHR2Q16671 573 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 PAN2Q504Q3 1202 aaKnown RBP22.58■■□□□ 1.21
VARS-224ENST00000479051 SHC4Q6S5L8 630 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 HACE1Q8IYU2 909 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 IQUBQ8NA54 791 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 CPB2Q96IY4 423 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 CDX2Q99626 313 aaPredicted RBP22.58■■□□□ 1.21
VARS-224ENST00000479051 LRRC27Q9C0I9 530 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 TMEM117Q9H0C3 514 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 CCDC113Q9H0I3 377 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 ZHX3Q9H4I2 956 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 CERS4Q9HA82 394 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 PARVGQ9HBI0 331 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 PCDHB2Q9Y5E7 798 aa22.58■■□□□ 1.21
VARS-224ENST00000479051 SFI1A8K8P3 1242 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 ACKR2O00590 384 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 N4BP3O15049 544 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 ARHGEF15O94989 841 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 FGFR1P11362 822 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 SCP2P22307 547 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 CACNB1Q02641 598 aaPredicted RBP22.57■■□□□ 1.2
VARS-224ENST00000479051 NAALADL2Q58DX5 795 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 SLC27A1Q6PCB7 646 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 APBB1IPQ7Z5R6 666 aaPredicted RBP22.57■■□□□ 1.2
VARS-224ENST00000479051 ZNF598Q86UK7 904 aaKnown RBP22.57■■□□□ 1.2
VARS-224ENST00000479051 GUCD1Q96NT3 240 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 ADPGKQ9BRR6 497 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 PRDM12Q9H4Q4 367 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 TMEM134Q9H6X4 195 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 ARHGAP28Q9P2N2 729 aa22.57■■□□□ 1.2
VARS-224ENST00000479051 B4GALT5O43286 388 aa22.56■■□□□ 1.2
VARS-224ENST00000479051 STRN3Q13033 797 aa22.56■■□□□ 1.2
VARS-224ENST00000479051 GIT2Q14161 759 aa22.56■■□□□ 1.2
VARS-224ENST00000479051 RESP18Q5W5W9 173 aa22.56■■□□□ 1.2
VARS-224ENST00000479051 ADALQ6DHV7 355 aa22.56■■□□□ 1.2
VARS-224ENST00000479051 MYCT1Q8N699 235 aa22.56■■□□□ 1.2
VARS-224ENST00000479051 DHX58Q96C10 678 aa22.56■■□□□ 1.2
VARS-224ENST00000479051 NTPCRQ9BSD7 190 aaKnown RBP22.56■■□□□ 1.2
VARS-224ENST00000479051 MRPL9Q9BYD2 267 aaKnown RBP22.56■■□□□ 1.2
VARS-224ENST00000479051 MAGEF1Q9HAY2 307 aa22.56■■□□□ 1.2
VARS-224ENST00000479051 MTUS1Q9ULD2 1270 aa22.56■■□□□ 1.2
VARS-224ENST00000479051 MYH11P35749 1972 aa22.56■■□□□ 1.2
VARS-224ENST00000479051 A0A087X0B3 334 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 A0A1B0GUA9 196 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 SLC16A4O15374 487 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 ATF7P17544 494 aaPredicted RBP22.55■■□□□ 1.2
VARS-224ENST00000479051 ABCD1P33897 745 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 CTNNB1P35222 781 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 GATMP50440 423 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 AMPD3Q01432 767 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 UBXN11Q5T124 520 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 SPOUT1Q5T280 376 aaKnown RBP22.55■■□□□ 1.2
VARS-224ENST00000479051 GLB1LQ6UWU2 654 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 TMEM192Q8IY95 271 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 SLC17A8Q8NDX2 589 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 FBXO22Q8NEZ5 403 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 C17orf80Q9BSJ5 609 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 MRPL4Q9BYD3 311 aaKnown RBP22.55■■□□□ 1.2
VARS-224ENST00000479051 TNMDQ9H2S6 317 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 UBN1Q9NPG3 1134 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 AAASQ9NRG9 546 aa22.55■■□□□ 1.2
VARS-224ENST00000479051 ITGA4P13612 1032 aa22.54■■□□□ 1.2
VARS-224ENST00000479051 FOSL2P15408 326 aa22.54■■□□□ 1.2
VARS-224ENST00000479051 ZNF131P52739 623 aa22.54■■□□□ 1.2
VARS-224ENST00000479051 DYMQ7RTS9 669 aa22.54■■□□□ 1.2
VARS-224ENST00000479051 MRPL10Q7Z7H8 261 aaKnown RBP22.54■■□□□ 1.2
VARS-224ENST00000479051 LRRC43Q8N309 656 aa22.54■■□□□ 1.2
VARS-224ENST00000479051 HELQQ8TDG4 1101 aa22.54■■□□□ 1.2
VARS-224ENST00000479051 MYLIPQ8WY64 445 aa22.54■■□□□ 1.2
VARS-224ENST00000479051 DDX12PQ92771 950 aa22.54■■□□□ 1.2
VARS-224ENST00000479051 CLP1Q92989 425 aaKnown RBP22.54■■□□□ 1.2
VARS-224ENST00000479051 KCNH3Q9ULD8 1083 aa22.54■■□□□ 1.2
VARS-224ENST00000479051 MRPL42Q9Y6G3 142 aaKnown RBP22.54■■□□□ 1.2
VARS-224ENST00000479051 MYMKA6NI61 221 aa22.53■■□□□ 1.2
VARS-224ENST00000479051 POLR2DO15514 142 aaKnown RBP22.53■■□□□ 1.2
VARS-224ENST00000479051 NPTXRO95502 500 aa22.53■■□□□ 1.2
VARS-224ENST00000479051 RB1P06400 928 aa22.53■■□□□ 1.2
VARS-224ENST00000479051 CMA1P23946 247 aa22.53■■□□□ 1.2
VARS-224ENST00000479051 EPC2Q52LR7 807 aa22.53■■□□□ 1.2
VARS-224ENST00000479051 ATF7IP2Q5U623 682 aa22.53■■□□□ 1.2
VARS-224ENST00000479051 FAM178BQ8IXR5 827 aa22.53■■□□□ 1.2
VARS-224ENST00000479051 TMEM161BQ8NDZ6 487 aa22.53■■□□□ 1.2
VARS-224ENST00000479051 URGCPQ8TCY9 931 aa22.53■■□□□ 1.2
VARS-224ENST00000479051 LPPQ93052 612 aa22.53■■□□□ 1.2
VARS-224ENST00000479051 CHAMP1Q96JM3 812 aa22.53■■□□□ 1.2
VARS-224ENST00000479051 CASD1Q96PB1 797 aa22.53■■□□□ 1.2
VARS-224ENST00000479051 EIF2AQ9BY44 585 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms