RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 NFKBIZQ9BYH8 718 aa10.84□□□□□ -0.67
NIFK-205ENST00000477693 NUP62CLQ9H1M0 184 aa10.84□□□□□ -0.67
NIFK-205ENST00000477693 BHMT2Q9H2M3 363 aa10.84□□□□□ -0.67
NIFK-205ENST00000477693 CLSTN2Q9H4D0 955 aa10.84□□□□□ -0.67
NIFK-205ENST00000477693 STK17AQ9UEE5 414 aa10.84□□□□□ -0.67
NIFK-205ENST00000477693 DNM3Q9UQ16 869 aa10.84□□□□□ -0.67
NIFK-205ENST00000477693 LOXHD1Q8IVV2 1947 aa10.84□□□□□ -0.67
NIFK-205ENST00000477693 A0A1B0GVL5 298 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 LINC01553A4QN01 128 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 POLR2DO15514 142 aaKnown RBP10.83□□□□□ -0.68
NIFK-205ENST00000477693 NR1I2O75469 434 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 CSDE1O75534 798 aaKnown RBP10.83□□□□□ -0.68
NIFK-205ENST00000477693 DGKIO75912 1065 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 UPP2O95045 317 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 STAG3L1P0CL83 205 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 ZSCAN20P17040 1043 aaPredicted RBP10.83□□□□□ -0.68
NIFK-205ENST00000477693 LIG1P18858 919 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 FGFR4P22455 802 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 GLRA2P23416 452 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 PHKA2P46019 1235 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 PTENP60484 403 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 FAM189BP81408 668 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 GRIN1Q05586 938 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 GRB10Q13322 594 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 CAPSQ13938 189 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 TFDP1Q14186 410 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 RRAGBQ5VZM2 374 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 RBM43Q6ZSC3 357 aaKnown RBP10.83□□□□□ -0.68
NIFK-205ENST00000477693 CNNM3Q8NE01 707 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 RASSF8Q8NHQ8 419 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 ASAP3Q8TDY4 903 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 ZNF689Q96CS4 500 aaPredicted RBP10.83□□□□□ -0.68
NIFK-205ENST00000477693 CDK5RAP3Q96JB5 506 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 PNMA5Q96PV4 448 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 POLR3FQ9H1D9 316 aaPredicted RBP10.83□□□□□ -0.68
NIFK-205ENST00000477693 TNMDQ9H2S6 317 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 ELAC1Q9H777 363 aaKnown RBP10.83□□□□□ -0.68
NIFK-205ENST00000477693 CHST12Q9NRB3 414 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 ADGRA3Q8IWK6 1321 aa10.83□□□□□ -0.68
NIFK-205ENST00000477693 TTC3P53804 2025 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 A0A0U1RQF3 1178 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 E9PMD0 336 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 SMC2O95347 1197 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 SRGAP2CP0DJJ0 459 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 ERVK-21P61565 698 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 TMEM119Q4V9L6 283 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 CAVIN1Q6NZI2 390 aaKnown RBP10.82□□□□□ -0.68
NIFK-205ENST00000477693 KRBA2Q6ZNG9 492 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 CATSPER4Q7RTX7 472 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 KCNK18Q7Z418 384 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 EPSTI1Q96J88 318 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 MINDY3Q9H8M7 445 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 GPRC5CQ9NQ84 441 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 AGPAT5Q9NUQ2 364 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 TMEM161AQ9NX61 479 aa10.82□□□□□ -0.68
NIFK-205ENST00000477693 PPP1R37O75864 691 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 LINC00271P0C7V0 271 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 GUCY2CP25092 1073 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 SLC12A3P55017 1021 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 ZNF445P59923 1031 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 MBTD1Q05BQ5 628 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 ZRSR1Q15695 479 aaKnown RBP10.81□□□□□ -0.68
NIFK-205ENST00000477693 FAM102BQ5T8I3 360 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 CDCA2Q69YH5 1023 aaPredicted RBP10.81□□□□□ -0.68
NIFK-205ENST00000477693 RINT1Q6NUQ1 792 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 C1orf186Q6ZWK4 172 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 MAEAQ7L5Y9 396 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 ECHDC2Q86YB7 292 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 CMTR2Q8IYT2 770 aaKnown RBP10.81□□□□□ -0.68
NIFK-205ENST00000477693 SYT2Q8N9I0 419 aaPredicted RBP10.81□□□□□ -0.68
NIFK-205ENST00000477693 MYLIPQ8WY64 445 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 KIFAP3Q92845 792 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 CLP1Q92989 425 aaKnown RBP10.81□□□□□ -0.68
NIFK-205ENST00000477693 TGS1Q96RS0 853 aaKnown RBP10.81□□□□□ -0.68
NIFK-205ENST00000477693 TIPINQ9BVW5 301 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 GOLPH3LQ9H4A5 285 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 PRDM12Q9H4Q4 367 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 KCND2Q9NZV8 630 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 LRFN2Q9ULH4 789 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 PIN4Q9Y237 131 aaKnown RBP10.81□□□□□ -0.68
NIFK-205ENST00000477693 PCDHB7Q9Y5E2 793 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 TTC28Q96AY4 2481 aa10.81□□□□□ -0.68
NIFK-205ENST00000477693 EYSQ5T1H1 3165 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 EPOPA6NHQ4 379 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 C5orf67F2Z3F1 127 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 EOMESO95936 686 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 PLA2G4BP0C869 781 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 SKIP12755 728 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 FOSL2P15408 326 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 PLCG1P19174 1290 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 AXLP30530 894 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 HOXA11P31270 313 aaPredicted RBP10.8□□□□□ -0.68
NIFK-205ENST00000477693 STAT6P42226 847 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 NAMPTP43490 491 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 BTG3Q14201 252 aaPredicted RBP10.8□□□□□ -0.68
NIFK-205ENST00000477693 PPP2R5AQ15172 486 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 E2F4Q16254 413 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 AMHR2Q16671 573 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 ZSCAN23Q3MJ62 389 aa10.8□□□□□ -0.68
NIFK-205ENST00000477693 LONRF3Q496Y0 759 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms