RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 GGPS1O95749 300 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 CNGA1P29973 690 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 GJA5P36382 358 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 ARL2P36404 184 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 EIF4A3P38919 411 aaKnown RBP8.64□□□□□ -1.03
VMA21-203ENST00000477649 MAGEA1P43355 309 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 CASP4P49662 377 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 KLK7P49862 253 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 CYP2J2P51589 502 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 INHBEP58166 350 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 MYL7Q01449 175 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 SP2Q02086 613 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 KLHL30Q0D2K2 578 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 SLC18A3Q16572 532 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 CCL15Q16663 113 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 WHAMMP3Q1A5X7 153 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 FAM110CQ1W6H9 321 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 ASTE1Q2TB18 679 aaPredicted RBP8.64□□□□□ -1.03
VMA21-203ENST00000477649 ZNF792Q3KQV3 632 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 TDRD12Q587J7 1177 aaKnown RBP8.64□□□□□ -1.03
VMA21-203ENST00000477649 ZNF569Q5MCW4 686 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 CCDC122Q5T0U0 273 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 SPRYD7Q5W111 196 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 PLA2G4FQ68DD2 849 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 CCDC62Q6P9F0 684 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 MAMDC4Q6UXC1 1216 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 MOB2Q70IA6 237 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 DHX37Q8IY37 1157 aaKnown RBP8.64□□□□□ -1.03
VMA21-203ENST00000477649 PDCL2Q8N4E4 241 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 CCDC155Q8N6L0 562 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 ACRBPQ8NEB7 543 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 DEPTORQ8TB45 409 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 ATP8B4Q8TF62 1192 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 EMID1Q96A84 441 aaPredicted RBP8.64□□□□□ -1.03
VMA21-203ENST00000477649 MS4A4AQ96JQ5 239 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 RPGRIP1Q96KN7 1286 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 ALS2CR12Q96Q35 445 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 POLR3FQ9H1D9 316 aaPredicted RBP8.64□□□□□ -1.03
VMA21-203ENST00000477649 TXNRD2Q9NNW7 524 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 LZTFL1Q9NQ48 299 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 ARHGAP20Q9P2F6 1191 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 CDC23Q9UJX2 597 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 PCDHA13Q9Y5I0 950 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 STYXL1Q9Y6J8 313 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 MANSC4A6NHS7 340 aaPredicted RBP8.63□□□□□ -1.03
VMA21-203ENST00000477649 EPHB6O15197 1021 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 HBP1O60381 514 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 PRLRP16471 622 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 TCF7P36402 384 aaPredicted RBP8.63□□□□□ -1.03
VMA21-203ENST00000477649 AP3M2P53677 418 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 JAM2P57087 298 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 POU5F1Q01860 360 aaKnown RBP8.63□□□□□ -1.03
VMA21-203ENST00000477649 POU5F1BQ06416 359 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 RAPGEF1Q13905 1077 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 TFDP1Q14186 410 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 BMS1Q14692 1282 aaKnown RBP8.63□□□□□ -1.03
VMA21-203ENST00000477649 Q3C1V9 767 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 MTERF2Q49AM1 385 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 HGSNATQ68CP4 663 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 IQCEQ6IPM2 695 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 DLK2Q6UY11 383 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 ZPBP2Q6X784 338 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 ENOSF1Q7L5Y1 443 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 MAEAQ7L5Y9 396 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 GPD1LQ8N335 351 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 SECISBP2LQ93073 1101 aaKnown RBP8.63□□□□□ -1.03
VMA21-203ENST00000477649 FGD4Q96M96 766 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 MFSD14AQ96MC6 490 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 GPR20Q99678 358 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 CRACR2AQ9BSW2 395 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 TMEM8AQ9HCN3 771 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 NLRC4Q9NPP4 1024 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 XPNPEP1Q9NQW7 623 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 APEX2Q9UBZ4 518 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 COQ4Q9Y3A0 265 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 REXO2Q9Y3B8 237 aaKnown RBP8.63□□□□□ -1.03
VMA21-203ENST00000477649 MRFAP1Q9Y605 127 aa8.63□□□□□ -1.03
VMA21-203ENST00000477649 COL1A2P08123 1366 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 SLC15A5A6NIM6 579 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 ZNF233A6NK53 670 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 BTBD19C9JJ37 291 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 K7ERI5 159 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 HNRNPDLO14979 420 aaKnown RBP8.62□□□□□ -1.03
VMA21-203ENST00000477649 MAGEB2O15479 319 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 EXTL3O43909 919 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 ADCY3O60266 1144 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 GH1P01241 217 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 TXNP10599 105 aaKnown RBP8.62□□□□□ -1.03
VMA21-203ENST00000477649 SLC9A1P19634 815 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 ATP4AP20648 1035 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 SOX5P35711 763 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 LIG4P49917 911 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 MXI1P50539 228 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 CDC42EP1Q00587 391 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 CKAP4Q07065 602 aaKnown RBP8.62□□□□□ -1.03
VMA21-203ENST00000477649 GRM1Q13255 1194 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 SURF1Q15526 300 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 SNRNP35Q16560 246 aaKnown RBP8.62□□□□□ -1.03
VMA21-203ENST00000477649 ZNF484Q5JVG2 852 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 WDR78Q5VTH9 848 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms