RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 BDP1A6H8Y1 2624 aa24.11■■□□□ 1.45
COL9A3-211ENST00000477612 ARF4P18085 180 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-211ENST00000477612 GTF2F1P35269 517 aaKnown RBP eCLIP24.11■■□□□ 1.451e-6■■□□□ 13.7
COL9A3-211ENST00000477612 FAM187BQ17R55 369 aa24.11■■□□□ 1.45
COL9A3-211ENST00000477612 NOMO2Q5JPE7 1267 aa24.11■■□□□ 1.45
COL9A3-211ENST00000477612 ARL6IP4Q66PJ3 421 aaKnown RBP24.11■■□□□ 1.45
COL9A3-211ENST00000477612 PPP4R3CPQ6ZMV5 832 aa24.11■■□□□ 1.45
COL9A3-211ENST00000477612 MAEAQ7L5Y9 396 aa24.11■■□□□ 1.45
COL9A3-211ENST00000477612 SMG8Q8ND04 991 aaKnown RBP24.11■■□□□ 1.45
COL9A3-211ENST00000477612 PRIMPOLQ96LW4 560 aa24.11■■□□□ 1.45
COL9A3-211ENST00000477612 CSRNP2Q9H175 543 aa24.11■■□□□ 1.45
COL9A3-211ENST00000477612 DDX19AQ9NUU7 478 aaKnown RBP24.11■■□□□ 1.45
COL9A3-211ENST00000477612 TBC1D13Q9NVG8 400 aa24.11■■□□□ 1.45
COL9A3-211ENST00000477612 PUF60Q9UHX1 559 aaKnown RBP24.11■■□□□ 1.45
COL9A3-211ENST00000477612 GRXCR2A6NFK2 248 aa24.1■■□□□ 1.45
COL9A3-211ENST00000477612 INPPL1O15357 1258 aa24.1■■□□□ 1.45
COL9A3-211ENST00000477612 BCAR1P56945 870 aa24.1■■□□□ 1.45
COL9A3-211ENST00000477612 KRT17Q04695 432 aa24.1■■□□□ 1.45
COL9A3-211ENST00000477612 KRT79Q5XKE5 535 aa24.1■■□□□ 1.45
COL9A3-211ENST00000477612 KCTD17Q8N5Z5 321 aa24.1■■□□□ 1.45
COL9A3-211ENST00000477612 EFHBQ8N7U6 833 aa24.1■■□□□ 1.45
COL9A3-211ENST00000477612 MMTAG2Q9BU76 263 aaKnown RBP24.1■■□□□ 1.45
COL9A3-211ENST00000477612 BHMT2Q9H2M3 363 aa24.1■■□□□ 1.45
COL9A3-211ENST00000477612 FZD8Q9H461 694 aa24.1■■□□□ 1.45
COL9A3-211ENST00000477612 NRDE2Q9H7Z3 1164 aa24.1■■□□□ 1.45
COL9A3-211ENST00000477612 RSAD1Q9HA92 442 aa24.1■■□□□ 1.45
COL9A3-211ENST00000477612 UBN1Q9NPG3 1134 aa24.1■■□□□ 1.45
COL9A3-211ENST00000477612 MYH11P35749 1972 aa24.09■■□□□ 1.45
COL9A3-211ENST00000477612 A0A1B0GUA9 196 aa24.09■■□□□ 1.45
COL9A3-211ENST00000477612 H3BQ06 376 aaPredicted RBP24.09■■□□□ 1.45
COL9A3-211ENST00000477612 PBX3P40426 434 aa24.09■■□□□ 1.45
COL9A3-211ENST00000477612 ALDH7A1P49419 539 aaKnown RBP24.09■■□□□ 1.45
COL9A3-211ENST00000477612 DLX2Q07687 328 aaPredicted RBP24.09■■□□□ 1.45
COL9A3-211ENST00000477612 LONRF3Q496Y0 759 aa24.09■■□□□ 1.45
COL9A3-211ENST00000477612 HYIQ5T013 277 aa24.09■■□□□ 1.45
COL9A3-211ENST00000477612 PTCRAQ6ISU1 281 aaPredicted RBP24.09■■□□□ 1.45
COL9A3-211ENST00000477612 CPB2Q96IY4 423 aa24.09■■□□□ 1.45
COL9A3-211ENST00000477612 NECAB3Q96P71 396 aaPredicted RBP24.09■■□□□ 1.45
COL9A3-211ENST00000477612 EIF2AQ9BY44 585 aaKnown RBP24.09■■□□□ 1.45
COL9A3-211ENST00000477612 NGRNQ9NPE2 291 aaKnown RBP24.09■■□□□ 1.45
COL9A3-211ENST00000477612 KANSL3Q9P2N6 904 aa24.09■■□□□ 1.45
COL9A3-211ENST00000477612 IPPQ9Y573 584 aa24.09■■□□□ 1.45
COL9A3-211ENST00000477612 FSD2A1L4K1 749 aa24.08■■□□□ 1.45
COL9A3-211ENST00000477612 LRRIQ4A6NIV6 560 aa24.08■■□□□ 1.45
COL9A3-211ENST00000477612 PP2D1A8MPX8 630 aa24.08■■□□□ 1.45
COL9A3-211ENST00000477612 EYA4O95677 639 aa24.08■■□□□ 1.45
COL9A3-211ENST00000477612 NAMPTP43490 491 aa24.08■■□□□ 1.45
COL9A3-211ENST00000477612 BRAPQ7Z569 592 aa24.08■■□□□ 1.45
COL9A3-211ENST00000477612 MICAL1Q8TDZ2 1067 aa24.08■■□□□ 1.45
COL9A3-211ENST00000477612 BSNDQ8WZ55 320 aa24.08■■□□□ 1.45
COL9A3-211ENST00000477612 INTS4Q96HW7 963 aaKnown RBP24.08■■□□□ 1.45
COL9A3-211ENST00000477612 CDCA3Q99618 268 aaPredicted RBP24.08■■□□□ 1.45
COL9A3-211ENST00000477612 C2orf40Q9H1Z8 148 aa24.08■■□□□ 1.45
COL9A3-211ENST00000477612 IGFLR1Q9H665 355 aa24.08■■□□□ 1.45
COL9A3-211ENST00000477612 PRMT7Q9NVM4 692 aaPredicted RBP24.08■■□□□ 1.45
COL9A3-211ENST00000477612 DAXXQ9UER7 740 aaPredicted RBP24.08■■□□□ 1.45
COL9A3-211ENST00000477612 DNM3Q9UQ16 869 aa24.08■■□□□ 1.45
COL9A3-211ENST00000477612 PCDHGC5Q9Y5F6 944 aa24.08■■□□□ 1.45
COL9A3-211ENST00000477612 LINC01565O15544 149 aa24.07■■□□□ 1.44
COL9A3-211ENST00000477612 TBX10O75333 385 aa24.07■■□□□ 1.44
COL9A3-211ENST00000477612 CSPG5O95196 566 aa24.07■■□□□ 1.44
COL9A3-211ENST00000477612 GALTP07902 379 aa24.07■■□□□ 1.44
COL9A3-211ENST00000477612 ITGA4P13612 1032 aa24.07■■□□□ 1.44
COL9A3-211ENST00000477612 CDC25AP30304 524 aa24.07■■□□□ 1.44
COL9A3-211ENST00000477612 PPP2R5AQ15172 486 aa24.07■■□□□ 1.44
COL9A3-211ENST00000477612 ZBTB8OSQ8IWT0 167 aa24.07■■□□□ 1.44
COL9A3-211ENST00000477612 URGCPQ8TCY9 931 aa24.07■■□□□ 1.44
COL9A3-211ENST00000477612 KIFAP3Q92845 792 aa24.07■■□□□ 1.44
COL9A3-211ENST00000477612 MSLNLQ96KJ4 702 aa24.07■■□□□ 1.44
COL9A3-211ENST00000477612 TLE6Q9H808 572 aa24.07■■□□□ 1.44
COL9A3-211ENST00000477612 E9PMD0 336 aa24.06■■□□□ 1.44
COL9A3-211ENST00000477612 B4GALT5O43286 388 aa24.06■■□□□ 1.44
COL9A3-211ENST00000477612 IL9P15248 144 aa24.06■■□□□ 1.44
COL9A3-211ENST00000477612 PDCP20941 246 aa24.06■■□□□ 1.44
COL9A3-211ENST00000477612 NRIP1P48552 1158 aa24.06■■□□□ 1.44
COL9A3-211ENST00000477612 AFF1P51825 1210 aaKnown RBP24.06■■□□□ 1.44
COL9A3-211ENST00000477612 KCNC3Q14003 757 aa24.06■■□□□ 1.44
COL9A3-211ENST00000477612 DUSP6Q16828 381 aa24.06■■□□□ 1.44
COL9A3-211ENST00000477612 SLC27A1Q6PCB7 646 aa24.06■■□□□ 1.44
COL9A3-211ENST00000477612 FAM178BQ8IXR5 827 aa24.06■■□□□ 1.44
COL9A3-211ENST00000477612 TMEM175Q9BSA9 504 aa24.06■■□□□ 1.44
COL9A3-211ENST00000477612 CCDC113Q9H0I3 377 aa24.06■■□□□ 1.44
COL9A3-211ENST00000477612 INPP5FQ9Y2H2 1132 aa24.06■■□□□ 1.44
COL9A3-211ENST00000477612 ZMYM2Q9UBW7 1377 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 NT5C1B-RDH14C9J2C7 533 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 ZC3H11AO75152 810 aaKnown RBP eCLIP24.05■■□□□ 1.44
COL9A3-211ENST00000477612 DDHD2O94830 711 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 GLP2RO95838 553 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 RNASELQ05823 741 aaKnown RBP24.05■■□□□ 1.44
COL9A3-211ENST00000477612 EP400NLQ6ZTU2 488 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 ZNF280BQ86YH2 543 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 TMEM169Q96HH4 297 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 IGSF21Q96ID5 467 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 TCF25Q9BQ70 676 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 RNF39Q9H2S5 420 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 CLEC1BQ9P126 229 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 FAM50BQ9Y247 325 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 GIT1Q9Y2X7 761 aa24.05■■□□□ 1.44
COL9A3-211ENST00000477612 ACKR2O00590 384 aa24.04■■□□□ 1.44
COL9A3-211ENST00000477612 SLC26A4O43511 780 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms