RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 CAP2P40123 477 aa15.68■□□□□ 0.1
HDAC6-220ENST00000477528 SARNPP82979 210 aaKnown RBP15.68■□□□□ 0.1
HDAC6-220ENST00000477528 IL9RQ01113 521 aa15.68■□□□□ 0.1
HDAC6-220ENST00000477528 SNRNP35Q16560 246 aaKnown RBP15.68■□□□□ 0.1
HDAC6-220ENST00000477528 KSR1Q8IVT5 923 aa15.68■□□□□ 0.1
HDAC6-220ENST00000477528 RNF34Q969K3 372 aa15.68■□□□□ 0.1
HDAC6-220ENST00000477528 C11orf70Q9BRQ4 267 aa15.68■□□□□ 0.1
HDAC6-220ENST00000477528 L1RE1Q9UN81 338 aa15.68■□□□□ 0.1
HDAC6-220ENST00000477528 ZNF142P52746 1687 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-220ENST00000477528 PMS2P54278 862 aa15.68■□□□□ 0.1
HDAC6-220ENST00000477528 TRIM72Q6ZMU5 477 aa15.68■□□□□ 0.1
HDAC6-220ENST00000477528 RBM41Q96IZ5 413 aaKnown RBP15.68■□□□□ 0.1
HDAC6-220ENST00000477528 NLRP4Q96MN2 994 aa15.68■□□□□ 0.1
HDAC6-220ENST00000477528 FBXO28Q9NVF7 368 aa15.68■□□□□ 0.1
HDAC6-220ENST00000477528 PSD3Q9NYI0 1048 aa15.68■□□□□ 0.1
HDAC6-220ENST00000477528 AGO2Q9UKV8 859 aaKnown RBP15.68■□□□□ 0.1
HDAC6-220ENST00000477528 SCN11AQ9UI33 1791 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 H7C0C1 242 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 M0QZ92 97 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 TLR3O15455 904 aaKnown RBP15.67■□□□□ 0.1
HDAC6-220ENST00000477528 ATP5OP48047 213 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 XKR3Q5GH77 459 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 XRRA1Q6P2D8 792 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 CASC4Q6P4E1 433 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 C4orf32Q8N8J7 132 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 TEX13BQ9BXU2 312 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 FBXL5Q9UKA1 691 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-220ENST00000477528 FKBP1AP62942 108 aaKnown RBP15.67■□□□□ 0.1
HDAC6-220ENST00000477528 SCARA5Q6ZMJ2 495 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 ARHGEF18Q6ZSZ5 1173 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 HACE1Q8IYU2 909 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 ZNF507Q8TCN5 953 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 SUCLA2Q9P2R7 463 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-220ENST00000477528 CALB1P05937 261 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 CCDC137Q6PK04 289 aaKnown RBP15.67■□□□□ 0.1
HDAC6-220ENST00000477528 THNSL1Q8IYQ7 743 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 ANKZF1Q9H8Y5 726 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 ANKEF1Q9NU02 776 aa15.67■□□□□ 0.1
HDAC6-220ENST00000477528 RBAKQ9NYW8 714 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-220ENST00000477528 ROBO3Q96MS0 1386 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 MAFGO15525 162 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 BUB1BO60566 1050 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-220ENST00000477528 TJP3O95049 919 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 CAV1Q03135 178 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 CFAP157Q5JU67 520 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 MICALL2Q8IY33 904 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 PSPC1Q8WXF1 523 aaKnown RBP15.66■□□□□ 0.1
HDAC6-220ENST00000477528 GINM1Q9NU53 330 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 UVRAGQ9P2Y5 699 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 SLC15A2Q16348 729 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 CRY2Q49AN0 593 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 PASD1Q8IV76 773 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 MYOZ2Q9NPC6 264 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 OLFML3Q9NRN5 406 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 COL14A1Q05707 1796 aaKnown RBP15.66■□□□□ 0.1
HDAC6-220ENST00000477528 MCF2LO15068 1137 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 GNA15P30679 374 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 ZNF667Q5HYK9 610 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 GJB7Q6PEY0 223 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 TAB3Q8N5C8 712 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-220ENST00000477528 ZNF280CQ8ND82 737 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 RSRC1Q96IZ7 334 aaKnown RBP15.66■□□□□ 0.1
HDAC6-220ENST00000477528 IFT122Q9HBG6 1241 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 C19orf81C9J6K1 198 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 ACSL3O95573 720 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 CASP4P49662 377 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 RASSF2P50749 326 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 ZNF131P52739 623 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 TKFCQ3LXA3 575 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 DACT2Q5SW24 774 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 KCNK18Q7Z418 384 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 DPP9Q86TI2 863 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 MKL1Q969V6 931 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 HVCN1Q96D96 273 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 MOV10L1Q9BXT6 1211 aaKnown RBP15.66■□□□□ 0.1
HDAC6-220ENST00000477528 TRAF3IP3Q9Y228 551 aa15.66■□□□□ 0.1
HDAC6-220ENST00000477528 MYO1CO00159 1063 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 RAD51CO43502 376 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 ZBTB7AO95365 584 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 PSMC6P62333 389 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 AKAP3O75969 853 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 MAGOHP61326 146 aaKnown RBP15.65■□□□□ 0.1
HDAC6-220ENST00000477528 PPP2R2AP63151 447 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 ANKRD20A3Q5VUR7 823 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 CCDC62Q6P9F0 684 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 CYFIP1Q7L576 1253 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 TRIM50Q86XT4 487 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 RDM1Q8NG50 284 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 LRRC8CQ8TDW0 803 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 MRIQ9BWK5 157 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 C2orf40Q9H1Z8 148 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 BAIAP2L1Q9UHR4 511 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 ADAMTSL3P82987 1691 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 ARP10275 920 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 TM4SF1P30408 202 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 AP3M2P53677 418 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 DYNLT1P63172 113 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 TPCN2Q8NHX9 752 aa15.65■□□□□ 0.1
HDAC6-220ENST00000477528 HEMGNQ9BXL5 484 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms