RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 TCEAL1Q15170 157 aa22.76■■□□□ 1.23
LIMS2-214ENST00000476932 ST6GALNAC4Q9H4F1 302 aa22.76■■□□□ 1.23
LIMS2-214ENST00000476932 ADRB2P07550 413 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 VCAM1P19320 739 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 COPB2P35606 906 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 HAUS6Q7Z4H7 955 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 RHOT2Q8IXI1 618 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 XXYLT1Q8NBI6 393 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 MTMR14Q8NCE2 650 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 PSMD1Q99460 953 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 DPH5Q9H2P9 285 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 ZNF277Q9NRM2 450 aaPredicted RBP22.75■■□□□ 1.23
LIMS2-214ENST00000476932 ARID2Q68CP9 1835 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 CTNNA1P35221 906 aaKnown RBP22.75■■□□□ 1.23
LIMS2-214ENST00000476932 C11orf63Q6NUN7 778 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 LARGE2Q8N3Y3 721 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 SYTL5Q8TDW5 730 aaPredicted RBP22.75■■□□□ 1.23
LIMS2-214ENST00000476932 ZBED3Q96IU2 234 aaPredicted RBP22.75■■□□□ 1.23
LIMS2-214ENST00000476932 GPRC5CQ9NQ84 441 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 FAM114A2Q9NRY5 505 aa22.75■■□□□ 1.23
LIMS2-214ENST00000476932 BACH1O14867 736 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 MAPK13O15264 365 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 FTLP02792 175 aaPredicted RBP22.74■■□□□ 1.23
LIMS2-214ENST00000476932 CHRNB2P17787 502 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 YWHABP31946 246 aaKnown RBP22.74■■□□□ 1.23
LIMS2-214ENST00000476932 MCCD1P59942 119 aaPredicted RBP22.74■■□□□ 1.23
LIMS2-214ENST00000476932 PRPF4BQ13523 1007 aaKnown RBP22.74■■□□□ 1.23
LIMS2-214ENST00000476932 RPUSD2Q8IZ73 545 aaKnown RBP22.74■■□□□ 1.23
LIMS2-214ENST00000476932 PCDHB18PQ96TA0 734 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 TXLNGYQ9BZA5 131 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 TMEM117Q9H0C3 514 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 TMOD4Q9NZQ9 345 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 NOCTQ9UK39 431 aaKnown RBP22.74■■□□□ 1.23
LIMS2-214ENST00000476932 USP20Q9Y2K6 914 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 UTP11Q9Y3A2 253 aaKnown RBP22.74■■□□□ 1.23
LIMS2-214ENST00000476932 SAMM50Q9Y512 469 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 ALG6Q9Y672 507 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 FAM169AQ9Y6X4 670 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 MYZAPP0CAP1 466 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 MDH1P40925 334 aaKnown RBP22.74■■□□□ 1.23
LIMS2-214ENST00000476932 MARCKSL1P49006 195 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 NCKAP1LP55160 1127 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 DGKZQ13574 1117 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 MTMR1Q13613 665 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 TNIP1Q15025 636 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 ZNF746Q6NUN9 644 aaPredicted RBP22.74■■□□□ 1.23
LIMS2-214ENST00000476932 AADACL2Q6P093 401 aa22.74■■□□□ 1.23
LIMS2-214ENST00000476932 ADAT2Q7Z6V5 191 aaKnown RBP22.74■■□□□ 1.23
LIMS2-214ENST00000476932 PHF20L1A8MW92 1017 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 PMM2O15305 246 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 MTMR3Q13615 1198 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 PTGISQ16647 500 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 EFCAB13Q8IY85 973 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 PRPF38AQ8NAV1 312 aaKnown RBP22.73■■□□□ 1.23
LIMS2-214ENST00000476932 EPS8L1Q8TE68 723 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 UBLCP1Q8WVY7 318 aaPredicted RBP22.73■■□□□ 1.23
LIMS2-214ENST00000476932 KRT35Q92764 455 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 VTI1AQ96AJ9 217 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 KREMEN1Q96MU8 473 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 EPN3Q9H201 632 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 NDUFAB1O14561 156 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 SLC16A4O15374 487 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 MXI1P50539 228 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 DUPD1Q68J44 220 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 LRRC4CQ9HCJ2 640 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 PFASO15067 1338 aa22.73■■□□□ 1.23
LIMS2-214ENST00000476932 GOLGA6L10A6NI86 522 aa22.72■■□□□ 1.23
LIMS2-214ENST00000476932 WDR46O15213 610 aaKnown RBP22.72■■□□□ 1.23
LIMS2-214ENST00000476932 SGPL1O95470 568 aa22.72■■□□□ 1.23
LIMS2-214ENST00000476932 ALAS1P13196 640 aa22.72■■□□□ 1.23
LIMS2-214ENST00000476932 DR1Q01658 176 aa22.72■■□□□ 1.23
LIMS2-214ENST00000476932 CETN1Q12798 172 aa22.72■■□□□ 1.23
LIMS2-214ENST00000476932 TBC1D10BQ4KMP7 808 aaPredicted RBP22.72■■□□□ 1.23
LIMS2-214ENST00000476932 NOP9Q86U38 636 aaKnown RBP22.72■■□□□ 1.23
LIMS2-214ENST00000476932 MCF2L2Q86YR7 1114 aa22.72■■□□□ 1.23
LIMS2-214ENST00000476932 FAM71AQ8IYT1 594 aa22.72■■□□□ 1.23
LIMS2-214ENST00000476932 CPXCR1Q8N123 301 aa22.72■■□□□ 1.23
LIMS2-214ENST00000476932 TAAR1Q96RJ0 339 aa22.72■■□□□ 1.23
LIMS2-214ENST00000476932 RAVER2Q9HCJ3 691 aaKnown RBP22.72■■□□□ 1.23
LIMS2-214ENST00000476932 ZDHHC18Q9NUE0 388 aa22.72■■□□□ 1.23
LIMS2-214ENST00000476932 CTTNBP2NLQ9P2B4 639 aa22.72■■□□□ 1.23
LIMS2-214ENST00000476932 ADSSP30520 456 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 PEX3P56589 373 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 C4orf19Q8IY42 314 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 RTKN2Q8IZC4 609 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 NAP1L3Q99457 506 aaPredicted RBP22.71■■□□□ 1.23
LIMS2-214ENST00000476932 TRIM31Q9BZY9 425 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 SLC38A10Q9HBR0 1119 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 HOMER2Q9NSB8 354 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 SLC12A6Q9UHW9 1150 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 KIAA1217Q5T5P2 1943 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 GOLGA8IPA6NC78 632 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 GOLGA8JA6NMD2 632 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 PPFIA2O75334 1257 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 CCNE2O96020 404 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 EIF2AK2P19525 551 aaKnown RBP22.71■■□□□ 1.23
LIMS2-214ENST00000476932 HPDP32754 393 aaPredicted RBP22.71■■□□□ 1.23
LIMS2-214ENST00000476932 DHX9Q08211 1270 aaKnown RBP22.71■■□□□ 1.23
LIMS2-214ENST00000476932 PGM5Q15124 567 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 NBPF9Q3BBW0 867 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms