RNA–Protein interactions for RNA: ENST00000476535.1

LCLAT1-208, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 4

Gene LCLAT1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-208ENST00000476535 ZC3H11AO75152 810 aaKnown RBP eCLIP19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 MED24O75448 989 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 SRGAP2BP0DMP2 458 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 NCLP19338 710 aaKnown RBP19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 COL9A1P20849 921 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 MUTP22033 750 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 U2AF2P26368 475 aaKnown RBP eCLIP19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 RPA1P27694 616 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 TECP42680 631 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 LONRF3Q496Y0 759 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 TMC7Q7Z402 723 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 VN1R2Q8NFZ6 395 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 ERMNQ8TAM6 284 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 TMEM169Q96HH4 297 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 NACC1Q96RE7 527 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 NRDE2Q9H7Z3 1164 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 RSAD1Q9HA92 442 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 NOL7Q9UMY1 257 aaKnown RBP19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 INPP5FQ9Y2H2 1132 aa19.6■□□□□ 0.73
LCLAT1-208ENST00000476535 HIDE1A8MVS5 230 aa19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 INO80B-WBP1J3KQ70 363 aa19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 ST18O60284 1047 aa19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 USO1O60763 962 aaKnown RBP19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 GPR37L1O60883 481 aa19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 GLRA2P23416 452 aa19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 RNASELQ05823 741 aaKnown RBP19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 MBTD1Q05BQ5 628 aa19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 SMC1AQ14683 1233 aaKnown RBP19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 BMS1Q14692 1282 aaKnown RBP19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 NOTUMQ6P988 496 aa19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 MRPL43Q8N983 215 aaKnown RBP19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 MCPH1Q8NEM0 835 aa19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 URGCPQ8TCY9 931 aa19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 POLR3FQ9H1D9 316 aaPredicted RBP19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 UBN1Q9NPG3 1134 aa19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 KANSL3Q9P2N6 904 aa19.59■□□□□ 0.73
LCLAT1-208ENST00000476535 NT5C1B-RDH14C9J2C7 533 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 GALTP07902 379 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 ALADP13716 330 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 FXR2P51116 673 aaKnown RBP eCLIP19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 NCBP1Q09161 790 aaKnown RBP19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 AMHR2Q16671 573 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 TMEM31Q5JXX7 168 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 HAUS3Q68CZ6 603 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 C4orf32Q8N8J7 132 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 IGSF21Q96ID5 467 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 ZBP1Q9H171 429 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 CSRNP2Q9H175 543 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 STK39Q9UEW8 545 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 KIF3AQ9Y496 699 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 TRIOO75962 3097 aa19.58■□□□□ 0.72
LCLAT1-208ENST00000476535 TDRD15B5MCY1 1934 aaKnown RBP19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 A0A087WWV3 80 aa19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 C2orf71A6NGG8 1288 aa19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 INPPL1O15357 1258 aa19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 RBM10P98175 930 aaKnown RBP19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 POTEGQ6S5H5 508 aa19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 DDX53Q86TM3 631 aaKnown RBP19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 TMEM173Q86WV6 379 aaPredicted RBP19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 SMG8Q8ND04 991 aaKnown RBP19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 SUSD6Q92537 303 aa19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 LRFN3Q9BTN0 628 aa19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 C11orf16Q9NQ32 467 aa19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 USP15Q9Y4E8 981 aaPredicted RBP19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 IPPQ9Y573 584 aa19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 IRAK3Q9Y616 596 aa19.57■□□□□ 0.72
LCLAT1-208ENST00000476535 DCXO43602 365 aa19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 ITGA4P13612 1032 aa19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 ARF4P18085 180 aaPredicted RBP19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 SLC11A1P49279 550 aa19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 GIT2Q14161 759 aa19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 ANKRD54Q6NXT1 300 aa19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 ZNF280BQ86YH2 543 aa19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 VPS52Q8N1B4 723 aa19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 TMEM175Q9BSA9 504 aa19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 EIF2AQ9BY44 585 aaKnown RBP19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 UPF2Q9HAU5 1272 aaKnown RBP19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 DNAJB4Q9UDY4 337 aa19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 ZMYM2Q9UBW7 1377 aa19.56■□□□□ 0.72
LCLAT1-208ENST00000476535 B4GALT3O60512 393 aa19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 CTSAP10619 480 aa19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 HOXB8P17481 243 aaPredicted RBP19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 TOB1P50616 345 aaPredicted RBP19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 AFF1P51825 1210 aaKnown RBP19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 PDIA5Q14554 519 aa19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 CDCA2Q69YH5 1023 aaPredicted RBP19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 PPP4R3CPQ6ZMV5 832 aa19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 BCL7CQ8WUZ0 217 aaPredicted RBP19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 CASP10Q92851 521 aa19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 CPB2Q96IY4 423 aa19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 PRIMPOLQ96LW4 560 aa19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 FAM193BQ96PV7 902 aaPredicted RBP19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 GBP3Q9H0R5 595 aa19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 S1PR5Q9H228 398 aa19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 GPRC5CQ9NQ84 441 aa19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 STK24Q9Y6E0 443 aa19.55■□□□□ 0.72
LCLAT1-208ENST00000476535 ARHGEF35A5YM69 484 aa19.54■□□□□ 0.72
LCLAT1-208ENST00000476535 LRRIQ4A6NIV6 560 aa19.54■□□□□ 0.72
LCLAT1-208ENST00000476535 LAD1O00515 517 aa19.54■□□□□ 0.72
LCLAT1-208ENST00000476535 DDHD2O94830 711 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms