RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 GLB1LQ6UWU2 654 aa18■□□□□ 0.47
COL1A1-205ENST00000476387 VN1R2Q8NFZ6 395 aa18■□□□□ 0.47
COL1A1-205ENST00000476387 PIGOQ8TEQ8 1089 aa18■□□□□ 0.47
COL1A1-205ENST00000476387 POLR3CQ9BUI4 534 aaPredicted RBP18■□□□□ 0.47
COL1A1-205ENST00000476387 USP15Q9Y4E8 981 aaPredicted RBP18■□□□□ 0.47
COL1A1-205ENST00000476387 MED24O75448 989 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 SPATA31C1P0DKV0 1188 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 XRCC6P12956 609 aaKnown RBP eCLIP17.99■□□□□ 0.47
COL1A1-205ENST00000476387 PLA2G5P39877 138 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 RARRES1P49788 294 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 BCAR1P56945 870 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 CUL4AQ13619 759 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 PCBP1Q15365 356 aaKnown RBP eCLIP17.99■□□□□ 0.47
COL1A1-205ENST00000476387 HERC4Q5GLZ8 1057 aaPredicted RBP17.99■□□□□ 0.47
COL1A1-205ENST00000476387 NOMO2Q5JPE7 1267 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 POTEGQ6S5H5 508 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 TMC7Q7Z402 723 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 CATSPER3Q86XQ3 398 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 PGBD4Q96DM1 585 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 LRWD1Q9UFC0 647 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 STK24Q9Y6E0 443 aa17.99■□□□□ 0.47
COL1A1-205ENST00000476387 HIDE1A8MVS5 230 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 LOC730098B7Z3J9 87 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 USO1O60763 962 aaKnown RBP17.98■□□□□ 0.47
COL1A1-205ENST00000476387 SRGAP2CP0DJJ0 459 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 PDCP20941 246 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 RPA1P27694 616 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 CCT6AP40227 531 aaKnown RBP17.98■□□□□ 0.47
COL1A1-205ENST00000476387 MXD4Q14582 209 aaPredicted RBP17.98■□□□□ 0.47
COL1A1-205ENST00000476387 SMC1AQ14683 1233 aaKnown RBP17.98■□□□□ 0.47
COL1A1-205ENST00000476387 BMS1Q14692 1282 aaKnown RBP17.98■□□□□ 0.47
COL1A1-205ENST00000476387 FERMT3Q86UX7 667 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 RNF135Q8IUD6 432 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 C4orf32Q8N8J7 132 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 MRPL43Q8N983 215 aaKnown RBP17.98■□□□□ 0.47
COL1A1-205ENST00000476387 SUSD6Q92537 303 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 TMEM169Q96HH4 297 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 NACC1Q96RE7 527 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 PHF7Q9BWX1 381 aaPredicted RBP17.98■□□□□ 0.47
COL1A1-205ENST00000476387 XPNPEP1Q9NQW7 623 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.98■□□□□ 0.47
COL1A1-205ENST00000476387 PCDHB2Q9Y5E7 798 aa17.98■□□□□ 0.47
COL1A1-205ENST00000476387 VPS37CA5D8V6 355 aaPredicted RBP17.97■□□□□ 0.47
COL1A1-205ENST00000476387 OFD1O75665 1012 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 HOXB8P17481 243 aaPredicted RBP17.97■□□□□ 0.47
COL1A1-205ENST00000476387 MUTP22033 750 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 HOXA11P31270 313 aaPredicted RBP17.97■□□□□ 0.47
COL1A1-205ENST00000476387 PRPHP41219 470 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 RBM10P98175 930 aaKnown RBP17.97■□□□□ 0.47
COL1A1-205ENST00000476387 POU5F1BQ06416 359 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 TFDP1Q14186 410 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 CBX2Q14781 532 aaPredicted RBP17.97■□□□□ 0.47
COL1A1-205ENST00000476387 ANKRD54Q6NXT1 300 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 DTHD1Q6ZMT9 781 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 MRPL10Q7Z7H8 261 aaKnown RBP17.97■□□□□ 0.47
COL1A1-205ENST00000476387 RNF149Q8NC42 400 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 LPPQ93052 612 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 FAM122AQ96E09 287 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 MINDY3Q9H8M7 445 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 TBC1D13Q9NVG8 400 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 DBR1Q9UK59 544 aaKnown RBP17.97■□□□□ 0.47
COL1A1-205ENST00000476387 CNTNAP2Q9UHC6 1331 aa17.97■□□□□ 0.47
COL1A1-205ENST00000476387 TRIOO75962 3097 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 A0A087WWV3 80 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 ARHGEF35A5YM69 484 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 C2orf71A6NGG8 1288 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 K7ELQ4 463 aaPredicted RBP17.96■□□□□ 0.47
COL1A1-205ENST00000476387 ZC3H11AO75152 810 aaKnown RBP eCLIP17.96■□□□□ 0.47
COL1A1-205ENST00000476387 RNASELQ05823 741 aaKnown RBP17.96■□□□□ 0.47
COL1A1-205ENST00000476387 PDIA5Q14554 519 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 BRAPQ7Z569 592 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 DDX53Q86TM3 631 aaKnown RBP17.96■□□□□ 0.47
COL1A1-205ENST00000476387 IFNLR1Q8IU57 520 aaPredicted RBP17.96■□□□□ 0.47
COL1A1-205ENST00000476387 MCPH1Q8NEM0 835 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 SNX29Q8TEQ0 813 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 CASP10Q92851 521 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 S1PR5Q9H228 398 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 NRDE2Q9H7Z3 1164 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 STK39Q9UEW8 545 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 INPP5FQ9Y2H2 1132 aa17.96■□□□□ 0.47
COL1A1-205ENST00000476387 MUC6Q6W4X9 2439 aa17.96■□□□□ 0.46
COL1A1-205ENST00000476387 MEIS3P2A8K0S8 358 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 NT5C1B-RDH14C9J2C7 533 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 ERLIN2O94905 339 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 AXLP30530 894 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 PTENP60484 403 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 ATP2C1P98194 919 aaPredicted RBP17.95■□□□□ 0.46
COL1A1-205ENST00000476387 GIT2Q14161 759 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 LONRF3Q496Y0 759 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 UBXN11Q5T124 520 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 KRT79Q5XKE5 535 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 SYCE2Q6PIF2 218 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 AGMOQ6ZNB7 445 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 IGSF22Q8N9C0 903 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 CNNM3Q8NE01 707 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 URGCPQ8TCY9 931 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 CCDC51Q96ER9 411 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 IGSF21Q96ID5 467 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 POLR3FQ9H1D9 316 aaPredicted RBP17.95■□□□□ 0.46
COL1A1-205ENST00000476387 MUTYHQ9UIF7 546 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms