RNA–Protein interactions for RNA: ENST00000476222.5

RPS18-234, Transcript of ribosomal protein S18, humanhuman

TSL 1 (best)

Gene RPS18, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS18-234ENST00000476222 NOTUMQ6P988 496 aa12.99□□□□□ -0.33
RPS18-234ENST00000476222 MRPL10Q7Z7H8 261 aaKnown RBP12.99□□□□□ -0.33
RPS18-234ENST00000476222 NOSTRINQ8IVI9 506 aa12.99□□□□□ -0.33
RPS18-234ENST00000476222 HACE1Q8IYU2 909 aa12.99□□□□□ -0.33
RPS18-234ENST00000476222 MCPH1Q8NEM0 835 aa12.99□□□□□ -0.33
RPS18-234ENST00000476222 KHSRPQ92945 711 aaKnown RBP eCLIP12.99□□□□□ -0.334e-7■■□□□ 12.2
RPS18-234ENST00000476222 LPPQ93052 612 aa12.99□□□□□ -0.33
RPS18-234ENST00000476222 NACC1Q96RE7 527 aa12.99□□□□□ -0.33
RPS18-234ENST00000476222 LRFN3Q9BTN0 628 aa12.99□□□□□ -0.33
RPS18-234ENST00000476222 MINDY3Q9H8M7 445 aa12.99□□□□□ -0.33
RPS18-234ENST00000476222 RSAD1Q9HA92 442 aa12.99□□□□□ -0.33
RPS18-234ENST00000476222 UPF2Q9HAU5 1272 aaKnown RBP12.99□□□□□ -0.33
RPS18-234ENST00000476222 DBR1Q9UK59 544 aaKnown RBP12.99□□□□□ -0.33
RPS18-234ENST00000476222 INPP5FQ9Y2H2 1132 aa12.99□□□□□ -0.33
RPS18-234ENST00000476222 HCN4Q9Y3Q4 1203 aa12.99□□□□□ -0.33
RPS18-234ENST00000476222 HIDE1A8MVS5 230 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 PRR33A8MZF0 331 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 INO80B-WBP1J3KQ70 363 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 ST18O60284 1047 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 TSPAN1O60635 241 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 HOXB8P17481 243 aaPredicted RBP12.98□□□□□ -0.33
RPS18-234ENST00000476222 NCLP19338 710 aaKnown RBP12.98□□□□□ -0.33
RPS18-234ENST00000476222 MUTP22033 750 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 HOXA11P31270 313 aaPredicted RBP12.98□□□□□ -0.33
RPS18-234ENST00000476222 ARL2P36404 184 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 CAPSQ13938 189 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 KCNC3Q14003 757 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 RABEP1Q15276 862 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 LONRF3Q496Y0 759 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 TTC38Q5R3I4 469 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 DDX53Q86TM3 631 aaKnown RBP12.98□□□□□ -0.33
RPS18-234ENST00000476222 CATSPER3Q86XQ3 398 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 MRPL43Q8N983 215 aaKnown RBP12.98□□□□□ -0.33
RPS18-234ENST00000476222 TMEM87AQ8NBN3 555 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 PIGOQ8TEQ8 1089 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 CASP10Q92851 521 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 IGSF21Q96ID5 467 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 FAM193BQ96PV7 902 aaPredicted RBP12.98□□□□□ -0.33
RPS18-234ENST00000476222 KIF2CQ99661 725 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 POLR3CQ9BUI4 534 aaPredicted RBP12.98□□□□□ -0.33
RPS18-234ENST00000476222 TRIM6Q9C030 488 aaPredicted RBP12.98□□□□□ -0.33
RPS18-234ENST00000476222 TMEM60Q9H2L4 133 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 NRDE2Q9H7Z3 1164 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 USP15Q9Y4E8 981 aaPredicted RBP12.98□□□□□ -0.33
RPS18-234ENST00000476222 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
RPS18-234ENST00000476222 C2orf71A6NGG8 1288 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 MEIS3P2A8K0S8 358 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 NT5C1B-RDH14C9J2C7 533 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 USO1O60763 962 aaKnown RBP12.97□□□□□ -0.33
RPS18-234ENST00000476222 SPATA31C1P0DKV0 1188 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 ITGA4P13612 1032 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 RPA1P27694 616 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 CA8P35219 290 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 TECP42680 631 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 MBTD1Q05BQ5 628 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 TPRNQ4KMQ1 711 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 UBXN11Q5T124 520 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 ANKRD54Q6NXT1 300 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 AGMOQ6ZNB7 445 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 VPS52Q8N1B4 723 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 VN1R2Q8NFZ6 395 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 ASAP3Q8TDY4 903 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 PRIMPOLQ96LW4 560 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 TMEM175Q9BSA9 504 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 PHF7Q9BWX1 381 aaPredicted RBP12.97□□□□□ -0.33
RPS18-234ENST00000476222 RAB34Q9BZG1 259 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 GBP3Q9H0R5 595 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 ZBP1Q9H171 429 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 CSRNP2Q9H175 543 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 POLR3FQ9H1D9 316 aaPredicted RBP12.97□□□□□ -0.33
RPS18-234ENST00000476222 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
RPS18-234ENST00000476222 ARIH1Q9Y4X5 557 aaPredicted RBP12.97□□□□□ -0.33
RPS18-234ENST00000476222 IPPQ9Y573 584 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 IRAK3Q9Y616 596 aa12.97□□□□□ -0.33
RPS18-234ENST00000476222 ZMYM2Q9UBW7 1377 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.96□□□□□ -0.33
RPS18-234ENST00000476222 LAD1O00515 517 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 MED24O75448 989 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 GALTP07902 379 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 CTSAP10619 480 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 GLRA2P23416 452 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 U2AF2P26368 475 aaKnown RBP eCLIP12.96□□□□□ -0.331e-9■■■■■ 28.9
RPS18-234ENST00000476222 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.33
RPS18-234ENST00000476222 CBX2Q14781 532 aaPredicted RBP12.96□□□□□ -0.33
RPS18-234ENST00000476222 ZNF174Q15697 407 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 SLC27A1Q6PCB7 646 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 ZBTB8OSQ8IWT0 167 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 C2orf40Q9H1Z8 148 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 C11orf16Q9NQ32 467 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 DNAJB4Q9UDY4 337 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 HCFC2Q9Y5Z7 792 aa12.96□□□□□ -0.33
RPS18-234ENST00000476222 ARHGEF35A5YM69 484 aa12.95□□□□□ -0.34
RPS18-234ENST00000476222 FAM86C2PA6NEL3 165 aa12.95□□□□□ -0.34
RPS18-234ENST00000476222 LRRIQ4A6NIV6 560 aa12.95□□□□□ -0.34
RPS18-234ENST00000476222 LOC730098B7Z3J9 87 aa12.95□□□□□ -0.34
RPS18-234ENST00000476222 INPPL1O15357 1258 aa12.95□□□□□ -0.34
RPS18-234ENST00000476222 NR1I2O75469 434 aa12.95□□□□□ -0.34
RPS18-234ENST00000476222 CXCL14O95715 111 aa12.95□□□□□ -0.34
RPS18-234ENST00000476222 ALDH2P05091 517 aa12.95□□□□□ -0.34
RPS18-234ENST00000476222 ARF4P18085 180 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms