RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 NIFKQ9BYG3 293 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 PRDM10Q9NQV6 1147 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 NRBP2Q9NSY0 501 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 NAGPAQ9UK23 515 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 STAT5BP51692 787 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 ARHGAP44Q17R89 818 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 BRDTQ58F21 947 aaPredicted RBP16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 C1orf220Q5T0J3 134 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 ALKBH5Q6P6C2 394 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 METTL7BQ6UX53 244 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 CAGE1Q8TC20 777 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 SEPT1Q8WYJ6 367 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 ARHGAP28Q9P2N2 729 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 ZC3H4Q9UPT8 1303 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 GJA5P36382 358 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 TCF7P36402 384 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 MXI1P50539 228 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 BMS1Q14692 1282 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 SLC39A4Q6P5W5 647 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 TMCO3Q6UWJ1 677 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 CCDC127Q96BQ5 260 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 MMS19Q96T76 1030 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 MROH8Q9H579 483 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 DHX33Q9H6R0 707 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 ZNF408Q9H9D4 720 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 MYH10P35580 1976 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 ZNF185O15231 689 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 EPC2Q52LR7 807 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 KCNV1Q6PIU1 500 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 PCYT2Q99447 389 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 GPR88Q9GZN0 384 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 TMEM117Q9H0C3 514 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 PORCNQ9H237 461 aa16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 UBE2TQ9NPD8 197 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-215ENST00000475470 SCN4AP35499 1836 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 PRLRP16471 622 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 ERVK-9P63128 1117 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 CBX1P83916 185 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 STRN3Q13033 797 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 USP37Q86T82 979 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 FGD4Q96M96 766 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 AZI2Q9H6S1 392 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 ZNF446Q9NWS9 450 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 PNMA3Q9UL41 463 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 DNAJC25-GNG10A0A024R161 153 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 SOCS7O14512 581 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 PMM2O15305 246 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 RHOXF2BP0C7M4 288 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 GARTP22102 1010 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 RFC5P40937 340 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 LIG4P49917 911 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 TAS1R3Q7RTX0 852 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 GPD1LQ8N335 351 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 DEPTORQ8TB45 409 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 AFAP1L1Q8TED9 768 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 PARD3BQ8TEW8 1205 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 VTI1AQ96AJ9 217 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 RPGRIP1Q96KN7 1286 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 FBXL18Q96ME1 805 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 RHOXF2Q9BQY4 288 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 ANKZF1Q9H8Y5 726 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 DDX41Q9UJV9 622 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 HYOU1Q9Y4L1 999 aa16.67■□□□□ 0.26
RPUSD3-215ENST00000475470 LRRIQ4A6NIV6 560 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 BTNL10A8MVZ5 291 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 DDX3XO00571 662 aaKnown RBP eCLIP16.66■□□□□ 0.261e-6■■■■■ 29.4
RPUSD3-215ENST00000475470 PALMO75781 387 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 TCP1P17987 556 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 MAP2K1Q02750 393 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 NOA1Q8NC60 698 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 ASAP3Q8TDY4 903 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 U2AF1L4Q8WU68 220 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 TSKSQ9UJT2 592 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 SPDYE4A6NLX3 237 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 FOXN3O00409 490 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 NOP56O00567 594 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 NCK2O43639 380 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 LRRN2O75325 713 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 ARIH2O95376 493 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 CYP2C8P10632 490 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 SCP2P22307 547 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 GLRA2P23416 452 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 ARL2P36404 184 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 NAMPTP43490 491 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 MCCD1P59942 119 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 KRT39Q6A163 491 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 ARHGEF19Q8IW93 802 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 MSANTD4Q8NCY6 345 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 TMC2Q8TDI7 906 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 GLG1Q92896 1179 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 MFSD14AQ96MC6 490 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 CEP89Q96ST8 783 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 OSBPL9Q96SU4 736 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 SRCAPQ6ZRS2 3230 aa16.66■□□□□ 0.26
RPUSD3-215ENST00000475470 LRRC37A2A6NM11 1700 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 LRRIQ3A6PVS8 624 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 H2AFZP0C0S5 128 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 CYP24A1Q07973 514 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms