RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 POTEMA6NI47 508 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 ASAP2O43150 1006 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 MAFO75444 373 aaPredicted RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CSF2RAP15509 400 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 ITGB8P26012 769 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CASP14P31944 242 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CCT6AP40227 531 aaKnown RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 MGAT3Q09327 533 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CTTNQ14247 550 aaKnown RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 KARSQ15046 597 aaKnown RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 MTERF2Q49AM1 385 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CT47A1Q5JQC4 288 aaPredicted RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 TMEM240Q5SV17 173 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 EFCAB12Q6NXP0 572 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CNKSR3Q6P9H4 555 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 C10orf67Q8IYJ2 551 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 LINC01465Q8N7H1 131 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 MNS1Q8NEH6 495 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 SNX29Q8TEQ0 813 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 PPP1R13LQ8WUF5 828 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 DNAJB3Q8WWF6 145 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 SLC7A3Q8WY07 619 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 SEPT8Q92599 483 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 PLIN2Q99541 437 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CELF4Q9BZC1 486 aaKnown RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 FAM49AQ9H0Q0 323 aaPredicted RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 ATP6V0A4Q9HBG4 840 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 LZTFL1Q9NQ48 299 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 ZNF446Q9NWS9 450 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 RGL1Q9NZL6 768 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 ARID2Q68CP9 1835 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 UMODL1Q5DID0 1318 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 TNRC18O15417 2968 aaPredicted RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 A0A0U1RQJ8 604 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 ABHD14A-ACY1A0A1B0GW23 586 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 LRRC10BA6NIK2 292 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 MED24O75448 989 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 DGAT1O75907 488 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 SPATA31C1P0DKV0 1188 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 TXLNAP40222 546 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CRYBB1P53674 252 aaPredicted RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 POLGP54098 1239 aaPredicted RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 GYS2P54840 703 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CYP4A11Q02928 519 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 IKBKEQ14164 716 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 FILIP1LQ4L180 1135 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 XKR9Q5GH70 373 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 HYIQ5T013 277 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CDKAL1Q5VV42 579 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 TRAF7Q6Q0C0 670 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 RAD9BQ6WBX8 426 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 TSHZ1Q6ZSZ6 1077 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 ANO5Q75V66 913 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 ZNF410Q86VK4 478 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CATSPER3Q86XQ3 398 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 KIAA0319LQ8IZA0 1049 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 METTL13Q8N6R0 699 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 TRAPPC12Q8WVT3 735 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 ATRIPQ8WXE1 791 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 WNT8BQ93098 351 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CALML4Q96GE6 196 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 SCLYQ96I15 445 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CDK5RAP3Q96JB5 506 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 RNPC3Q96LT9 517 aaKnown RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 PANX2Q96RD6 677 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CEP89Q96ST8 783 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 TIPINQ9BVW5 301 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 INO80BQ9C086 356 aaPredicted RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 VPS16Q9H269 839 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 MRPL44Q9H9J2 332 aaKnown RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 DNM3Q9UQ16 869 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CTNND2Q9UQB3 1225 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 COLQQ9Y215 455 aaPredicted RBP4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 AKT3Q9Y243 479 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 CDY2AQ9Y6F7 541 aa4.58□□□□□ -1.68
GAPVD1-216ENST00000474637 ARHGEF35A5YM69 484 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 GOLGA6L9A6NEM1 432 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 PP2D1A8MPX8 630 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 RNF225M0QZC1 329 aaPredicted RBP4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 TRIM66O15016 1216 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 N4BP3O15049 544 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 GTPBP6O43824 516 aaPredicted RBP4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 NBNO60934 754 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 EYA4O95677 639 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 CHRNA1P02708 482 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 CTSHP09668 335 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 H2AFXP16104 143 aaPredicted RBP4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 PBX1P40424 430 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 UBA7P41226 1012 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 PRCPP42785 496 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 FXR1P51114 621 aaKnown RBP eCLIP4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 CLCN6P51797 869 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 POU5F1BQ06416 359 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 TFDP1Q14186 410 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 MXD4Q14582 209 aaPredicted RBP4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 BMS1Q14692 1282 aaKnown RBP4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 EMC2Q15006 297 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 KRT31Q15323 416 aa4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 PCBP1Q15365 356 aaKnown RBP eCLIP4.57□□□□□ -1.68
GAPVD1-216ENST00000474637 LRIT3Q3SXY7 679 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms