RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 ZNF507Q8TCN5 953 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 DHX38Q92620 1227 aaKnown RBP9.15□□□□□ -0.94
CNN3-205ENST00000474409 CTAGE1Q96RT6 745 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 NTPCRQ9BSD7 190 aaKnown RBP9.15□□□□□ -0.94
CNN3-205ENST00000474409 MRPL4Q9BYD3 311 aaKnown RBP9.15□□□□□ -0.94
CNN3-205ENST00000474409 CELF4Q9BZC1 486 aaKnown RBP9.15□□□□□ -0.94
CNN3-205ENST00000474409 CCDC113Q9H0I3 377 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 GBP3Q9H0R5 595 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 TMEM134Q9H6X4 195 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 IFT122Q9HBG6 1241 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 TYW1Q9NV66 732 aaKnown RBP9.15□□□□□ -0.94
CNN3-205ENST00000474409 PRMT7Q9NVM4 692 aaPredicted RBP9.15□□□□□ -0.94
CNN3-205ENST00000474409 ANKFY1Q9P2R3 1169 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 RWDD2AQ9UIY3 292 aa9.15□□□□□ -0.94
CNN3-205ENST00000474409 SCN1AP35498 2009 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 CNTNAP2Q9UHC6 1331 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 GOLGA6L19H0YKK7 550 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 CD4P01730 458 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 CLTBP09497 229 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 CKBP12277 381 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 DARSP14868 501 aaKnown RBP9.14□□□□□ -0.95
CNN3-205ENST00000474409 CRYBB1P53674 252 aaPredicted RBP9.14□□□□□ -0.95
CNN3-205ENST00000474409 TPM4P67936 248 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 MGAT3Q09327 533 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 KCNA1Q09470 495 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 PRPF4BQ13523 1007 aaKnown RBP9.14□□□□□ -0.95
CNN3-205ENST00000474409 LRRC26Q2I0M4 334 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 COL13A1Q5TAT6 717 aaPredicted RBP9.14□□□□□ -0.95
CNN3-205ENST00000474409 ARMCX5Q6P1M9 558 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 LRRC8DQ7L1W4 858 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 ANKRD33Q7Z3H0 272 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 IFNLR1Q8IU57 520 aaPredicted RBP9.14□□□□□ -0.95
CNN3-205ENST00000474409 RNF214Q8ND24 703 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 GOLGA5Q8TBA6 731 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 NOC3LQ8WTT2 800 aaKnown RBP9.14□□□□□ -0.95
CNN3-205ENST00000474409 ABHD8Q96I13 439 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 PRIMPOLQ96LW4 560 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 TOX2Q96NM4 488 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 BPIFA3Q9BQP9 254 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 STRA6Q9BX79 667 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 ADAMTS10Q9H324 1103 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 MINDY3Q9H8M7 445 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 CBX8Q9HC52 389 aa9.14□□□□□ -0.95
CNN3-205ENST00000474409 PRDM5Q9NQX1 630 aaPredicted RBP9.14□□□□□ -0.95
CNN3-205ENST00000474409 CCDC85CA6NKD9 419 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 SMTNL1A8MU46 457 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 PITPNM1O00562 1244 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 ACKR2O00590 384 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 PDXKO00764 312 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 TSPAN1O60635 241 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 CSDE1O75534 798 aaKnown RBP9.13□□□□□ -0.95
CNN3-205ENST00000474409 RPS6KA5O75582 802 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 NR3C1P04150 777 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 GHRP10912 638 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 HARSP12081 509 aaKnown RBP9.13□□□□□ -0.95
CNN3-205ENST00000474409 SELPP16109 830 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 FGFR4P22455 802 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 EIF4BP23588 611 aaKnown RBP9.13□□□□□ -0.95
CNN3-205ENST00000474409 NR2F2P24468 414 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 HOXD13P35453 343 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 CYP2J2P51589 502 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 PMS1P54277 932 aaKnown RBP9.13□□□□□ -0.95
CNN3-205ENST00000474409 TLE2Q04725 743 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 RBL2Q08999 1139 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 NCBP1Q09161 790 aaKnown RBP9.13□□□□□ -0.95
CNN3-205ENST00000474409 PAK2Q13177 524 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 PCBP1Q15365 356 aaKnown RBP eCLIP9.13□□□□□ -0.95
CNN3-205ENST00000474409 FAM187BQ17R55 369 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 TRIM71Q2Q1W2 868 aaKnown RBP9.13□□□□□ -0.95
CNN3-205ENST00000474409 ZNF568Q3ZCX4 644 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 ZNF618Q5T7W0 954 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 CENPPQ6IPU0 288 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 ZPBP2Q6X784 338 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 TAS1R3Q7RTX0 852 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 APBB1IPQ7Z5R6 666 aaPredicted RBP9.13□□□□□ -0.95
CNN3-205ENST00000474409 LUZP1Q86V48 1076 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 DHX40Q8IX18 779 aaKnown RBP9.13□□□□□ -0.95
CNN3-205ENST00000474409 CSGALNACT2Q8N6G5 542 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 TMEM40Q8WWA1 233 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 POMGNT1Q8WZA1 660 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 KCNN1Q92952 543 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 PPP1R12CQ9BZL4 782 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 KCTD10Q9H3F6 313 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 SEMA6BQ9H3T3 888 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 HIPK3Q9H422 1215 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 FZD8Q9H461 694 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 AGPAT3Q9NRZ7 376 aa9.13□□□□□ -0.95
CNN3-205ENST00000474409 CGNQ9P2M7 1197 aaKnown RBP9.13□□□□□ -0.95
CNN3-205ENST00000474409 PIN4Q9Y237 131 aaKnown RBP9.13□□□□□ -0.95
CNN3-205ENST00000474409 TSC2P49815 1807 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 TISP43B9A030 160 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 IKBKBO14920 756 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 N4BP3O15049 544 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 CLIC2O15247 247 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 B4GALT5O43286 388 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 FGFR1OPO95684 399 aaKnown RBP9.12□□□□□ -0.95
CNN3-205ENST00000474409 PIGRP01833 764 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 CHRNA1P02708 482 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 EDN1P05305 212 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 ARF4P18085 180 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms