RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 SSH1Q8WYL5 1049 aa6.37□□□□□ -1.39
FN1-219ENST00000474036 RTF1Q92541 710 aaKnown RBP6.37□□□□□ -1.39
FN1-219ENST00000474036 PHACTR3Q96KR7 559 aa6.37□□□□□ -1.39
FN1-219ENST00000474036 DRC1Q96MC2 740 aa6.37□□□□□ -1.39
FN1-219ENST00000474036 GUCD1Q96NT3 240 aa6.37□□□□□ -1.39
FN1-219ENST00000474036 PTPN18Q99952 460 aa6.37□□□□□ -1.39
FN1-219ENST00000474036 TRMT112Q9UI30 125 aaKnown RBP6.37□□□□□ -1.39
FN1-219ENST00000474036 RWDD3Q9Y3V2 267 aa6.37□□□□□ -1.39
FN1-219ENST00000474036 BACE2Q9Y5Z0 518 aa6.37□□□□□ -1.39
FN1-219ENST00000474036 DUSP10Q9Y6W6 482 aa6.37□□□□□ -1.39
FN1-219ENST00000474036 PMF1-BGLAPU3KQ54 211 aa6.37□□□□□ -1.39
FN1-219ENST00000474036 CCL15-CCL14A0A0B4J2E2 113 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 A0A1W2PQJ5 194 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 NOP56O00567 594 aaKnown RBP6.36□□□□□ -1.39
FN1-219ENST00000474036 WNT10BO00744 389 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 ANXA1P04083 346 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 CORO7P57737 925 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 SCRN1Q12765 414 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 EFEMP1Q12805 493 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 AIMP1Q12904 312 aaKnown RBP6.36□□□□□ -1.39
FN1-219ENST00000474036 CCL15Q16663 113 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 PARP10Q53GL7 1025 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 NT5DC1Q5TFE4 455 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 GTF2IRD2BQ6EKJ0 949 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 GTF2IRD2Q86UP8 949 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 CPNE8Q86YQ8 564 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 APOBEC3FQ8IUX4 373 aaKnown RBP6.36□□□□□ -1.39
FN1-219ENST00000474036 CKAP2LQ8IYA6 745 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 TDHQ8IZJ6 230 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 MAFAQ8NHW3 353 aaPredicted RBP6.36□□□□□ -1.39
FN1-219ENST00000474036 U2AF1L4Q8WU68 220 aaKnown RBP6.36□□□□□ -1.39
FN1-219ENST00000474036 COPS5Q92905 334 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 SYT3Q9BQG1 590 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 A0A1B0GUL6 1792 aa6.36□□□□□ -1.39
FN1-219ENST00000474036 MYPNQ86TC9 1320 aa6.35□□□□□ -1.39
FN1-219ENST00000474036 TFRCP02786 760 aaKnown RBP6.35□□□□□ -1.39
FN1-219ENST00000474036 CT47B1P0C2W7 299 aaPredicted RBP6.35□□□□□ -1.39
FN1-219ENST00000474036 MAGEA10P43363 369 aaPredicted RBP6.35□□□□□ -1.39
FN1-219ENST00000474036 LACTBP83111 547 aaPredicted RBP6.35□□□□□ -1.39
FN1-219ENST00000474036 PLP2Q04941 152 aa6.35□□□□□ -1.39
FN1-219ENST00000474036 MVPQ14764 893 aaKnown RBP6.35□□□□□ -1.39
FN1-219ENST00000474036 EEF1DP3Q658K8 133 aa6.35□□□□□ -1.39
FN1-219ENST00000474036 POMZP3Q6PJE2 187 aa6.35□□□□□ -1.39
FN1-219ENST00000474036 ITPRIPQ8IWB1 547 aa6.35□□□□□ -1.39
FN1-219ENST00000474036 CRACR2BQ8N4Y2 399 aaPredicted RBP6.35□□□□□ -1.39
FN1-219ENST00000474036 DIS3LQ8TF46 1054 aaKnown RBP6.35□□□□□ -1.39
FN1-219ENST00000474036 OPTNQ96CV9 577 aa6.35□□□□□ -1.39
FN1-219ENST00000474036 MTA3Q9BTC8 594 aa6.35□□□□□ -1.39
FN1-219ENST00000474036 TRIM55Q9BYV6 548 aa6.35□□□□□ -1.39
FN1-219ENST00000474036 VEZTQ9HBM0 779 aa6.35□□□□□ -1.39
FN1-219ENST00000474036 GPRC5CQ9NQ84 441 aa6.35□□□□□ -1.39
FN1-219ENST00000474036 LRP2BPQ9P2M1 347 aa6.35□□□□□ -1.39
FN1-219ENST00000474036 NOB1Q9ULX3 412 aaKnown RBP6.35□□□□□ -1.39
FN1-219ENST00000474036 RIPOR2Q9Y4F9 1068 aa6.35□□□□□ -1.39
FN1-219ENST00000474036 LTBP2Q14767 1821 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 SH3TC1Q8TE82 1336 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 NCOR1O75376 2440 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 CLRN2A0PK11 232 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 SH3D21A4FU49 640 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 CAPNS1P04632 268 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 ADRB1P08588 477 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 NCAM1P13591 858 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 TRIM27P14373 513 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 EIF2S2P20042 333 aaKnown RBP6.34□□□□□ -1.39
FN1-219ENST00000474036 SEPHS1P49903 392 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 UBXN2AP68543 259 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 RBL2Q08999 1139 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 SF1Q15637 639 aaKnown RBP6.34□□□□□ -1.39
FN1-219ENST00000474036 SLC10A5Q5PT55 438 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 DBX2Q6ZNG2 339 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 B3GNT8Q7Z7M8 397 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 FAM43AQ8N2R8 423 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 BRI3BPQ8WY22 251 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 ALG3Q92685 438 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 PAWRQ96IZ0 340 aaKnown RBP6.34□□□□□ -1.39
FN1-219ENST00000474036 GDF15Q99988 308 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 RNF38Q9H0F5 515 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 NKX2-4Q9H2Z4 354 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 SPATA6Q9NWH7 488 aaPredicted RBP6.34□□□□□ -1.39
FN1-219ENST00000474036 GULP1Q9UBP9 304 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 DBR1Q9UK59 544 aaKnown RBP6.34□□□□□ -1.39
FN1-219ENST00000474036 MSRB2Q9Y3D2 182 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 SIT1Q9Y3P8 196 aa6.34□□□□□ -1.39
FN1-219ENST00000474036 MAST2Q6P0Q8 1798 aa6.34□□□□□ -1.4
FN1-219ENST00000474036 PTPRFP10586 1907 aa6.33□□□□□ -1.4
FN1-219ENST00000474036 A0A1W2PQU0 124 aa6.33□□□□□ -1.4
FN1-219ENST00000474036 ELL2O00472 640 aaPredicted RBP6.33□□□□□ -1.4
FN1-219ENST00000474036 NOBOXO60393 691 aa6.33□□□□□ -1.4
FN1-219ENST00000474036 WDHD1O75717 1129 aaPredicted RBP6.33□□□□□ -1.4
FN1-219ENST00000474036 THBDP07204 575 aa6.33□□□□□ -1.4
FN1-219ENST00000474036 GJB1P08034 283 aa6.33□□□□□ -1.4
FN1-219ENST00000474036 PLS3P13797 630 aa6.33□□□□□ -1.4
FN1-219ENST00000474036 GRIA2P42262 883 aa6.33□□□□□ -1.4
FN1-219ENST00000474036 PSMC4P43686 418 aa6.33□□□□□ -1.4
FN1-219ENST00000474036 GNAI1P63096 354 aa6.33□□□□□ -1.4
FN1-219ENST00000474036 CALD1Q05682 793 aaKnown RBP6.33□□□□□ -1.4
FN1-219ENST00000474036 LMOD3Q0VAK6 560 aa6.33□□□□□ -1.4
FN1-219ENST00000474036 MAP3K12Q12852 859 aa6.33□□□□□ -1.4
FN1-219ENST00000474036 LRIT3Q3SXY7 679 aa6.33□□□□□ -1.4
FN1-219ENST00000474036 ZFYVE27Q5T4F4 411 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms