RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 MYCT1Q8N699 235 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 MCPH1Q8NEM0 835 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 LMBR1Q8WVP7 490 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 PRPF31Q8WWY3 499 aaKnown RBP8.39□□□□□ -1.07
CCDC93-207ENST00000474006 SMARCE1Q969G3 411 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 GSDMAQ96QA5 445 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 JPH2Q9BR39 696 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-207ENST00000474006 TIPINQ9BVW5 301 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 GZF1Q9H116 711 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-207ENST00000474006 SUCLA2Q9P2R7 463 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-207ENST00000474006 GTF2IRD1Q9UHL9 959 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 NOD1Q9Y239 953 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 PCDHA2Q9Y5H9 948 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 COL4A3BPQ9Y5P4 624 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 CASP8AP2Q9UKL3 1982 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 A0A0U1RQG5 324 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-207ENST00000474006 SMIM35A0A1B0GVV1 85 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 FRMD3A2A2Y4 597 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 BIN1O00499 593 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 FAM13AO94988 1023 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 CYP2C9P11712 490 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 COL6A1P12109 1028 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 PLS3P13797 630 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 TMOD1P28289 359 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 ATP1A2P50993 1020 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 CLCN3P51790 818 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 ZNF131P52739 623 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 SKOR1P84550 965 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 PTPN11Q06124 597 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-207ENST00000474006 MAPK7Q13164 816 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 ZSCAN23Q3MJ62 389 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 TMEM164Q5U3C3 297 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 SLC39A5Q6ZMH5 540 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 RUFY4Q6ZNE9 571 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 RBM43Q6ZSC3 357 aaKnown RBP8.38□□□□□ -1.07
CCDC93-207ENST00000474006 CCDC65Q8IXS2 484 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 LINC01465Q8N7H1 131 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 DIS3LQ8TF46 1054 aaKnown RBP8.38□□□□□ -1.07
CCDC93-207ENST00000474006 STK32AQ8WU08 396 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 TCP11Q8WWU5 503 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 KIFAP3Q92845 792 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 HPS3Q969F9 1004 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 PAWRQ96IZ0 340 aaKnown RBP8.38□□□□□ -1.07
CCDC93-207ENST00000474006 DRC1Q96MC2 740 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 NTPCRQ9BSD7 190 aaKnown RBP8.38□□□□□ -1.07
CCDC93-207ENST00000474006 SEZ6LQ9BYH1 1024 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 TRPV6Q9H1D0 765 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 POLR3FQ9H1D9 316 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-207ENST00000474006 PARVGQ9HBI0 331 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 RMND1Q9NWS8 449 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 TBC1D7Q9P0N9 293 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 TUBE1Q9UJT0 475 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 MAN1B1Q9UKM7 699 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 ODF2LQ9ULJ1 636 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 PLXNA1Q9UIW2 1896 aa8.38□□□□□ -1.07
CCDC93-207ENST00000474006 LRRC37A2A6NM11 1700 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 SYCE3A1L190 88 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 CCDC169A6NNP5 214 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 ASAP2O43150 1006 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 GAS2O43903 313 aaKnown RBP8.37□□□□□ -1.07
CCDC93-207ENST00000474006 TBCAO75347 108 aaKnown RBP8.37□□□□□ -1.07
CCDC93-207ENST00000474006 RHOBTB3O94955 611 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 SRGAP2CP0DJJ0 459 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 GAP43P17677 238 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 BMP6P22004 513 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 GLRA2P23416 452 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 NPTX2P47972 431 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 SMTNP53814 917 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 PEX3P56589 373 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 RTP1P59025 263 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 EHHADHQ08426 723 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 LAMTOR4Q0VGL1 99 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 STK4Q13043 487 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 COASYQ13057 564 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 PSMD2Q13200 908 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 MORC3Q14149 939 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 MXD4Q14582 209 aaPredicted RBP8.37□□□□□ -1.07
CCDC93-207ENST00000474006 KCNB1Q14721 858 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 PTGISQ16647 500 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 ODR4Q5SWX8 454 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 SASS6Q6UVJ0 657 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 ZNF720Q7Z2F6 126 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 NECAB2Q7Z6G3 386 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 RHPN2Q8IUC4 686 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 ANKMY2Q8IV38 441 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 KSR1Q8IVT5 923 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 NME8Q8N427 588 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 ASAP3Q8TDY4 903 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 DNAJB3Q8WWF6 145 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 PSPC1Q8WXF1 523 aaKnown RBP8.37□□□□□ -1.07
CCDC93-207ENST00000474006 BSNDQ8WZ55 320 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 CCDC47Q96A33 483 aaKnown RBP8.37□□□□□ -1.07
CCDC93-207ENST00000474006 IFT74Q96LB3 600 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 CTAGE1Q96RT6 745 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 FAM49AQ9H0Q0 323 aaPredicted RBP8.37□□□□□ -1.07
CCDC93-207ENST00000474006 C11orf49Q9H6J7 331 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 C17orf75Q9HAS0 396 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 SLC39A2Q9NP94 309 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 TRMT13Q9NUP7 481 aaKnown RBP8.37□□□□□ -1.07
CCDC93-207ENST00000474006 EXOC1Q9NV70 894 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms