RNA–Protein interactions for RNA: ENST00000473992.1

UBA7-204, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-204	ENST00000473992	PLCB3	Q01970	1234 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	NCBP1	Q09161	790 aa	Known RBP	12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	AMHR2	Q16671	573 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	CTC1	Q2NKJ3	1217 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	NOMO2	Q5JPE7	1267 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	KRT79	Q5XKE5	535 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	NOTUM	Q6P988	496 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	RBM23	Q86U06	439 aa	Known RBP	12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	SLC39A11	Q8N1S5	342 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	SMG8	Q8ND04	991 aa	Known RBP	12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	BSND	Q8WZ55	320 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	PPP2R3C	Q969Q6	453 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	MMTAG2	Q9BU76	263 aa	Known RBP	12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	EIF2A	Q9BY44	585 aa	Known RBP	12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	CSRNP2	Q9H175	543 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	NRDE2	Q9H7Z3	1164 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	RSAD1	Q9HA92	442 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	TBC1D13	Q9NVG8	400 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	SPG21	Q9NZD8	308 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	PUF60	Q9UHX1	559 aa	Known RBP	12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	LZTS1	Q9Y250	596 aa		12.83	□□□□□ -0.36
UBA7-204	ENST00000473992	FSCN2	O14926	492 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	EYA4	O95677	639 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	ITGA4	P13612	1032 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	IL9	P15248	144 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	ALDH7A1	P49419	539 aa	Known RBP	12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	KRT17	Q04695	432 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	DLX2	Q07687	328 aa	Predicted RBP	12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	ADAM15	Q13444	863 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	CDR2L	Q86X02	465 aa	Predicted RBP	12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	CNNM3	Q8NE01	707 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	URGCP	Q8TCY9	931 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	RSPH1	Q8WYR4	309 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	CCDC51	Q96ER9	411 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	GBP3	Q9H0R5	595 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	TLE6	Q9H808	572 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	IPP	Q9Y573	584 aa		12.82	□□□□□ -0.36
UBA7-204	ENST00000473992	VPS37C	A5D8V6	355 aa	Predicted RBP	12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	VWA3A	A6NCI4	1184 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	GRXCR2	A6NFK2	248 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	PER2	O15055	1255 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	TBX10	O75333	385 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	DDHD2	O94830	711 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	AFF1	P51825	1210 aa	Known RBP	12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	RNASEL	Q05823	741 aa	Known RBP	12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	ZRSR1	Q15695	479 aa	Known RBP	12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	CLUL1	Q15846	466 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	PLPP4	Q5VZY2	271 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	CDCA2	Q69YH5	1023 aa	Predicted RBP	12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	PDE12	Q6L8Q7	609 aa	Known RBP	12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	KCNK18	Q7Z418	384 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	ZNF280B	Q86YH2	543 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	ZBTB8OS	Q8IWT0	167 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	TCF25	Q9BQ70	676 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	C2orf40	Q9H1Z8	148 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	RNF39	Q9H2S5	420 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	ENTPD7	Q9NQZ7	604 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	PRMT7	Q9NVM4	692 aa	Predicted RBP	12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	DNAJB4	Q9UDY4	337 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	DNM3	Q9UQ16	869 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	HES2	Q9Y543	173 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	MYH11	P35749	1972 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	CNTNAP2	Q9UHC6	1331 aa		12.81	□□□□□ -0.36
UBA7-204	ENST00000473992	BRWD1	Q9NSI6	2320 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	SPTBN5	Q9NRC6	3674 aa	Known RBP	12.8	□□□□□ -0.36
UBA7-204	ENST00000473992		A0A1B0GUA9	196 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	B4GALT3	O60512	393 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	NPTXR	O95502	500 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	POMC	P01189	267 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	GALT	P07902	379 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	NAMPT	P43490	491 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	SLC11A1	P49279	550 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	NDUFV1	P49821	464 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	PPP2R5A	Q15172	486 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	DUSP6	Q16828	381 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	PUS10	Q3MIT2	529 aa	Known RBP	12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	ARL6IP4	Q66PJ3	421 aa	Known RBP	12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	SLC27A1	Q6PCB7	646 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	PPP4R3CP	Q6ZMV5	832 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	TMC7	Q7Z402	723 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	BRAP	Q7Z569	592 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	TMEM173	Q86WV6	379 aa	Predicted RBP	12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	EFHB	Q8N7U6	833 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	DEPTOR	Q8TB45	409 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	TMEM169	Q96HH4	297 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	IFT74	Q96LB3	600 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	PRIMPOL	Q96LW4	560 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	PNMA5	Q96PV4	448 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	FAM193B	Q96PV7	902 aa	Predicted RBP	12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	PLIN2	Q99541	437 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	APOL6	Q9BWW8	343 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	TRIM6	Q9C030	488 aa	Predicted RBP	12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	FZD8	Q9H461	694 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	NXF3	Q9H4D5	531 aa	Known RBP	12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	UBN1	Q9NPG3	1134 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	FOXD4L1	Q9NU39	408 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	MIOS	Q9NXC5	875 aa		12.8	□□□□□ -0.36
UBA7-204	ENST00000473992	KANSL3	Q9P2N6	904 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms