RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 GRM6O15303 877 aa20.93■□□□□ 0.94
PTCD3-210ENST00000473829 GUCY2CP25092 1073 aa20.93■□□□□ 0.94
PTCD3-210ENST00000473829 AXLP30530 894 aa20.93■□□□□ 0.94
PTCD3-210ENST00000473829 PPP4R3CPQ6ZMV5 832 aa20.93■□□□□ 0.94
PTCD3-210ENST00000473829 ZBTB8OSQ8IWT0 167 aa20.93■□□□□ 0.94
PTCD3-210ENST00000473829 SMG8Q8ND04 991 aaKnown RBP20.93■□□□□ 0.94
PTCD3-210ENST00000473829 DEPTORQ8TB45 409 aa20.93■□□□□ 0.94
PTCD3-210ENST00000473829 SYMPKQ92797 1274 aaKnown RBP20.93■□□□□ 0.94
PTCD3-210ENST00000473829 C11orf84Q9BUA3 381 aaPredicted RBP20.93■□□□□ 0.94
PTCD3-210ENST00000473829 C2orf40Q9H1Z8 148 aa20.93■□□□□ 0.94
PTCD3-210ENST00000473829 FZD8Q9H461 694 aa20.93■□□□□ 0.94
PTCD3-210ENST00000473829 RB1P06400 928 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 SKIP12755 728 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 PEX3P56589 373 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 CACNB1Q02641 598 aaPredicted RBP20.92■□□□□ 0.94
PTCD3-210ENST00000473829 PPP2R5AQ15172 486 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 ARSHQ5FYA8 562 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 NOTUMQ6P988 496 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 AGMOQ6ZNB7 445 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 MRPL10Q7Z7H8 261 aaKnown RBP20.92■□□□□ 0.94
PTCD3-210ENST00000473829 ABI1Q8IZP0 508 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 LRRC43Q8N309 656 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 RAD54LQ92698 747 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 CCDC51Q96ER9 411 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 IFT74Q96LB3 600 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 PRMT7Q9NVM4 692 aaPredicted RBP20.92■□□□□ 0.94
PTCD3-210ENST00000473829 LMCD1Q9NZU5 365 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 CNTNAP2Q9UHC6 1331 aa20.92■□□□□ 0.94
PTCD3-210ENST00000473829 SFI1A8K8P3 1242 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 ITGB1P05556 798 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 PRKCBP05771 671 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 PDIA4P13667 645 aaKnown RBP20.91■□□□□ 0.94
PTCD3-210ENST00000473829 LIG1P18858 919 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 NPTX2P47972 431 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 MCM6Q14566 821 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 STK38Q15208 465 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 FAM187BQ17R55 369 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 SPOUT1Q5T280 376 aaKnown RBP20.91■□□□□ 0.94
PTCD3-210ENST00000473829 KRI1Q8N9T8 703 aaKnown RBP20.91■□□□□ 0.94
PTCD3-210ENST00000473829 KLHL23Q8NBE8 558 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 COLGALT1Q8NBJ5 622 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 RASSF8Q8NHQ8 419 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 MRPL38Q96DV4 380 aaKnown RBP20.91■□□□□ 0.94
PTCD3-210ENST00000473829 PRIMPOLQ96LW4 560 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 DRC1Q96MC2 740 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 ZNF396Q96N95 335 aaPredicted RBP20.91■□□□□ 0.94
PTCD3-210ENST00000473829 PLVAPQ9BX97 442 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 ALG13Q9NP73 1137 aaKnown RBP20.91■□□□□ 0.94
PTCD3-210ENST00000473829 ZDHHC9Q9Y397 364 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 HES2Q9Y543 173 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 IPPQ9Y573 584 aa20.91■□□□□ 0.94
PTCD3-210ENST00000473829 A0A1B0GUA9 196 aa20.9■□□□□ 0.94
PTCD3-210ENST00000473829 OFD1O75665 1012 aa20.9■□□□□ 0.94
PTCD3-210ENST00000473829 NCLP19338 710 aaKnown RBP20.9■□□□□ 0.94
PTCD3-210ENST00000473829 DNAJB1P25685 340 aa20.9■□□□□ 0.94
PTCD3-210ENST00000473829 PBX3P40426 434 aa20.9■□□□□ 0.94
PTCD3-210ENST00000473829 AFF1P51825 1210 aaKnown RBP20.9■□□□□ 0.94
PTCD3-210ENST00000473829 DHX8Q14562 1220 aaKnown RBP20.9■□□□□ 0.94
PTCD3-210ENST00000473829 MAPK6Q16659 721 aa20.9■□□□□ 0.94
PTCD3-210ENST00000473829 GPBP1Q86WP2 473 aa20.9■□□□□ 0.94
PTCD3-210ENST00000473829 P2RX5Q93086 422 aa20.9■□□□□ 0.94
PTCD3-210ENST00000473829 TIPINQ9BVW5 301 aa20.9■□□□□ 0.94
PTCD3-210ENST00000473829 RNF39Q9H2S5 420 aa20.9■□□□□ 0.94
PTCD3-210ENST00000473829 NXF3Q9H4D5 531 aaKnown RBP20.9■□□□□ 0.94
PTCD3-210ENST00000473829 PDZD7Q9H5P4 517 aa20.9■□□□□ 0.94
PTCD3-210ENST00000473829 DAXXQ9UER7 740 aaPredicted RBP20.9■□□□□ 0.94
PTCD3-210ENST00000473829 PLAGL2Q9UPG8 496 aa20.9■□□□□ 0.94
PTCD3-210ENST00000473829 INPP5FQ9Y2H2 1132 aa20.9■□□□□ 0.94
PTCD3-210ENST00000473829 A0A087X0B3 334 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 CCDC169A6NNP5 214 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 SPTLC2O15270 562 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 CSPG5O95196 566 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 NPTXRO95502 500 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 YEATS4O95619 227 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 CAMK1Q14012 370 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 NAALADL2Q58DX5 795 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 SLC27A1Q6PCB7 646 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 GLB1LQ6UWU2 654 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 TAS1R3Q7RTX0 852 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 PGBD4Q96DM1 585 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 KCND2Q9NZV8 630 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 ARHGAP28Q9P2N2 729 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 MYO7AQ13402 2215 aa20.89■□□□□ 0.93
PTCD3-210ENST00000473829 ACKR2O00590 384 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 B4GALT3O60512 393 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 PPP6R2O75170 966 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 BRD1O95696 1058 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 LAG3P18627 525 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 EFNA5P52803 228 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 DNM1Q05193 864 aaKnown RBP20.88■□□□□ 0.93
PTCD3-210ENST00000473829 NCBP1Q09161 790 aaKnown RBP20.88■□□□□ 0.93
PTCD3-210ENST00000473829 DMP1Q13316 513 aaPredicted RBP20.88■□□□□ 0.93
PTCD3-210ENST00000473829 PRPF4BQ13523 1007 aaKnown RBP20.88■□□□□ 0.93
PTCD3-210ENST00000473829 NOMO2Q5JPE7 1267 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 EEF1DP3Q658K8 133 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.88■□□□□ 0.93
PTCD3-210ENST00000473829 SPPL3Q8TCT6 385 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 LARP4BQ92615 738 aaKnown RBP20.88■□□□□ 0.93
PTCD3-210ENST00000473829 CHAMP1Q96JM3 812 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 REEP2Q9BRK0 252 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms