RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 RSAD1Q9HA92 442 aa13.32□□□□□ -0.28
SMPD4-217ENST00000473720 HCFC2Q9Y5Z7 792 aa13.32□□□□□ -0.28
SMPD4-217ENST00000473720 DOCK6Q96HP0 2047 aa13.32□□□□□ -0.28
SMPD4-217ENST00000473720 CITO14578 2027 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 POTEMA6NI47 508 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 LOC730098B7Z3J9 87 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 INO80B-WBP1J3KQ70 363 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 ASAP2O43150 1006 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 GAS2O43903 313 aaKnown RBP13.31□□□□□ -0.28
SMPD4-217ENST00000473720 GALTP07902 379 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 WEE2P0C1S8 567 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 SLC11A1P49279 550 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 AFF1P51825 1210 aaKnown RBP13.31□□□□□ -0.28
SMPD4-217ENST00000473720 HERC4Q5GLZ8 1057 aaPredicted RBP13.31□□□□□ -0.28
SMPD4-217ENST00000473720 SYCE2Q6PIF2 218 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 AGMOQ6ZNB7 445 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 HFE2Q6ZVN8 426 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 ZBTB33Q86T24 672 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 MRPL43Q8N983 215 aaKnown RBP13.31□□□□□ -0.28
SMPD4-217ENST00000473720 BCL7CQ8WUZ0 217 aaPredicted RBP13.31□□□□□ -0.28
SMPD4-217ENST00000473720 CASP10Q92851 521 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 IGSF21Q96ID5 467 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 TRAIPQ9BWF2 469 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 APOL6Q9BWW8 343 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 XPNPEP1Q9NQW7 623 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 PPME1Q9Y570 386 aa13.31□□□□□ -0.28
SMPD4-217ENST00000473720 B4GALT3O60512 393 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 USO1O60763 962 aaKnown RBP13.3□□□□□ -0.28
SMPD4-217ENST00000473720 CLASP2O75122 1294 aaKnown RBP13.3□□□□□ -0.28
SMPD4-217ENST00000473720 ZNF623O75123 536 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 DDHD2O94830 711 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 ITGA4P13612 1032 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 HOXA11P31270 313 aaPredicted RBP13.3□□□□□ -0.28
SMPD4-217ENST00000473720 ST3GAL1Q11201 340 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 KCNC3Q14003 757 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 TFDP1Q14186 410 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 SAFBQ15424 915 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMPD4-217ENST00000473720 UBXN11Q5T124 520 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 RARS2Q5T160 578 aaKnown RBP13.3□□□□□ -0.28
SMPD4-217ENST00000473720 KANK3Q6NY19 840 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 C12orf76Q8N812 135 aaPredicted RBP13.3□□□□□ -0.28
SMPD4-217ENST00000473720 ASAP3Q8TDY4 903 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 SUSD6Q92537 303 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 EIF2AQ9BY44 585 aaKnown RBP13.3□□□□□ -0.28
SMPD4-217ENST00000473720 ZBP1Q9H171 429 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 S1PR5Q9H228 398 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 TMEM60Q9H2L4 133 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 FAN1Q9Y2M0 1017 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 HES2Q9Y543 173 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 ZNF318Q5VUA4 2279 aa13.3□□□□□ -0.28
SMPD4-217ENST00000473720 C2CD2LO14523 706 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 EPCAMP16422 314 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 OR1G1P47890 313 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 NCBP1Q09161 790 aaKnown RBP13.29□□□□□ -0.28
SMPD4-217ENST00000473720 GNL2Q13823 731 aaKnown RBP13.29□□□□□ -0.28
SMPD4-217ENST00000473720 CAPSQ13938 189 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 MXD4Q14582 209 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-217ENST00000473720 ZNF174Q15697 407 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 TPRNQ4KMQ1 711 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 ERICH6BQ5W0A0 696 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 CES5AQ6NT32 575 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 TMEM184AQ6ZMB5 413 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 CDR2LQ86X02 465 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-217ENST00000473720 EDAQ92838 391 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 C8orf76Q96K31 380 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 TRIM6Q9C030 488 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-217ENST00000473720 POLR3FQ9H1D9 316 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-217ENST00000473720 ANKEF1Q9NU02 776 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 PRG3Q9Y2Y8 225 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-217ENST00000473720 IPPQ9Y573 584 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 TRIOO75962 3097 aa13.29□□□□□ -0.28
SMPD4-217ENST00000473720 LRRIQ4A6NIV6 560 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 TSPAN1O60635 241 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 EIF5BO60841 1220 aaKnown RBP13.28□□□□□ -0.28
SMPD4-217ENST00000473720 DGAT1O75907 488 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 ALDH2P05091 517 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 MYBP10242 640 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 CTSAP10619 480 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 HOXB8P17481 243 aaPredicted RBP13.28□□□□□ -0.28
SMPD4-217ENST00000473720 NCLP19338 710 aaKnown RBP13.28□□□□□ -0.28
SMPD4-217ENST00000473720 MLH1P40692 756 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 RARRES1P49788 294 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 PTENP60484 403 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 ZXDAP98168 799 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 NOTUMQ6P988 496 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 MRPL10Q7Z7H8 261 aaKnown RBP13.28□□□□□ -0.28
SMPD4-217ENST00000473720 DDX53Q86TM3 631 aaKnown RBP13.28□□□□□ -0.28
SMPD4-217ENST00000473720 SMG8Q8ND04 991 aaKnown RBP13.28□□□□□ -0.28
SMPD4-217ENST00000473720 PBXIP1Q96AQ6 731 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 HSD17B14Q9BPX1 270 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 RNF39Q9H2S5 420 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 POMKQ9H5K3 350 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 GPRC5CQ9NQ84 441 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 KANSL3Q9P2N6 904 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 LIMCH1Q9UPQ0 1083 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 VWA8A3KMH1 1905 aa13.28□□□□□ -0.28
SMPD4-217ENST00000473720 TMEM221A6NGB7 291 aa13.27□□□□□ -0.29
SMPD4-217ENST00000473720 M0R296 226 aa13.27□□□□□ -0.29
SMPD4-217ENST00000473720 NRP1O14786 923 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms