RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 KIAA0753Q2KHM9 967 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 MTHFD1LQ6UB35 978 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 IFNLR1Q8IU57 520 aaPredicted RBP14.01□□□□□ -0.17
VPS13D-205ENST00000473099 LINC01465Q8N7H1 131 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 TRPV1Q8NER1 839 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 RAET1EQ8TD07 263 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 CACTINQ8WUQ7 758 aaKnown RBP14.01□□□□□ -0.17
VPS13D-205ENST00000473099 BORCS6Q96GS4 357 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 PANX2Q96RD6 677 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 KIFC3Q9BVG8 833 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 NAA15Q9BXJ9 866 aaKnown RBP14.01□□□□□ -0.17
VPS13D-205ENST00000473099 EDEM3Q9BZQ6 932 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 STYXL1Q9Y6J8 313 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 TRIP11Q15643 1979 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 A0A1W2PQJ5 194 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 STX10O60499 249 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 MSCO60682 206 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 RPLP2P05387 115 aaKnown RBP14□□□□□ -0.17
VPS13D-205ENST00000473099 MYL3P08590 195 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 C6orf222P0C671 652 aaPredicted RBP14□□□□□ -0.17
VPS13D-205ENST00000473099 TRIM21P19474 475 aaKnown RBP14□□□□□ -0.17
VPS13D-205ENST00000473099 KCNJ6P48051 423 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 CASP4P49662 377 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 MCCD1P59942 119 aaPredicted RBP14□□□□□ -0.17
VPS13D-205ENST00000473099 IGBP1P78318 339 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 CACNB2Q08289 660 aaPredicted RBP14□□□□□ -0.17
VPS13D-205ENST00000473099 BFSP1Q12934 665 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
VPS13D-205ENST00000473099 TSR1Q2NL82 804 aaKnown RBP14□□□□□ -0.17
VPS13D-205ENST00000473099 TAS1R3Q7RTX0 852 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 ZNF410Q86VK4 478 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 RHPN2Q8IUC4 686 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 LRRC71Q8N4P6 559 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 RNF149Q8NC42 400 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 SLAIN1Q8ND83 568 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 ZNF397Q8NF99 534 aaPredicted RBP14□□□□□ -0.17
VPS13D-205ENST00000473099 TRAPPC12Q8WVT3 735 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 POMGNT1Q8WZA1 660 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 ABHD8Q96I13 439 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 FBXL18Q96ME1 805 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 PCMTD1Q96MG8 357 aaPredicted RBP14□□□□□ -0.17
VPS13D-205ENST00000473099 MTG1Q9BT17 334 aaPredicted RBP14□□□□□ -0.17
VPS13D-205ENST00000473099 MRPL4Q9BYD3 311 aaKnown RBP14□□□□□ -0.17
VPS13D-205ENST00000473099 CCDC113Q9H0I3 377 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 DAAM1Q9Y4D1 1078 aa14□□□□□ -0.17
VPS13D-205ENST00000473099 SMIM35A0A1B0GVV1 85 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 P4HA2O15460 535 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 MFAP3LO75121 409 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 GYPCP04921 128 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 SMIM10L2AP0DMW4 78 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 SMIM10L2BP0DMW5 78 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 PRKAR2AP13861 404 aaKnown RBP13.99□□□□□ -0.17
VPS13D-205ENST00000473099 CST5P28325 142 aaPredicted RBP13.99□□□□□ -0.17
VPS13D-205ENST00000473099 CLCN3P51790 818 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 PTENP60484 403 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 PURAQ00577 322 aaKnown RBP13.99□□□□□ -0.17
VPS13D-205ENST00000473099 DRP2Q13474 957 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 FAM187BQ17R55 369 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 DCAF17Q5H9S7 520 aaPredicted RBP13.99□□□□□ -0.17
VPS13D-205ENST00000473099 MAP3K21Q5TCX8 1036 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 TCERG1LQ5VWI1 586 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 GPD1LQ8N335 351 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 TC2NQ8N9U0 490 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 NEK11Q8NG66 645 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 KAT2BQ92831 832 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 SLC35C1Q96A29 364 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 PRIMPOLQ96LW4 560 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 CBWD1Q9BRT8 395 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 NUCKS1Q9H1E3 243 aaKnown RBP13.99□□□□□ -0.17
VPS13D-205ENST00000473099 KCNF1Q9H3M0 494 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 PRMT7Q9NVM4 692 aaPredicted RBP13.99□□□□□ -0.17
VPS13D-205ENST00000473099 CAPN11Q9UMQ6 739 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 AKT3Q9Y243 479 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 SIK3Q9Y2K2 1263 aa13.99□□□□□ -0.17
VPS13D-205ENST00000473099 LUC7L2Q9Y383 392 aaKnown RBP13.99□□□□□ -0.17
VPS13D-205ENST00000473099 PDCD11Q14690 1871 aaKnown RBP13.99□□□□□ -0.17
VPS13D-205ENST00000473099 MBLAC1A4D2B0 266 aaPredicted RBP13.98□□□□□ -0.17
VPS13D-205ENST00000473099 ANKRD63C9JTQ0 380 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 ACKR2O00590 384 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 EXTL3O43909 919 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 PRKCBP05771 671 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 SRGAP2CP0DJJ0 459 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 CASP14P31944 242 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 VAMP7P51809 220 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 CCZ1BP86790 482 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 CCZ1P86791 482 aaPredicted RBP13.98□□□□□ -0.17
VPS13D-205ENST00000473099 RBL2Q08999 1139 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 CETN1Q12798 172 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 PCBP1Q15365 356 aaKnown RBP eCLIP13.98□□□□□ -0.17
VPS13D-205ENST00000473099 GNASQ5JWF2 1037 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 NFRKBQ6P4R8 1299 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 SLC39A4Q6P5W5 647 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 GBP6Q6ZN66 633 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 PCSK9Q8NBP7 692 aaKnown RBP13.98□□□□□ -0.17
VPS13D-205ENST00000473099 TMC2Q8TDI7 906 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 LMBR1Q8WVP7 490 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 LENG1Q96BZ8 264 aaPredicted RBP13.98□□□□□ -0.17
VPS13D-205ENST00000473099 NLRP4Q96MN2 994 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 PCIF1Q9H4Z3 704 aa13.98□□□□□ -0.17
VPS13D-205ENST00000473099 XPNPEP3Q9NQH7 507 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms