RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 APOL5Q9BWW9 433 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 ZSWIM5Q9P217 1185 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 AGAP1Q9UPQ3 857 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 PCDHA5Q9Y5H7 936 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 TCOF1Q13428 1488 aaKnown RBP9.14□□□□□ -0.95
CD47-204ENST00000471694 ADCY3O60266 1144 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 ENTPD3O75355 529 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 PCDH8O95206 1070 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 PLCG1P19174 1290 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 DEUP1Q05D60 604 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 TMEM259Q4ZIN3 620 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 NKX2-3Q8TAU0 364 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 SCINQ9Y6U3 715 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 ADM5C9JUS6 153 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 H3BRJ5 948 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 ARIH2O95376 493 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 PLEKHA8P1O95397 391 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 CKMP06732 381 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 AKR1B1P15121 316 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 YWHABP31946 246 aaKnown RBP9.14□□□□□ -0.95
CD47-204ENST00000471694 GUCY2FP51841 1108 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 TMED2Q15363 201 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 ITIH5Q86UX2 942 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 ERLEC1Q96DZ1 483 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 TSEN34Q9BSV6 310 aaKnown RBP9.14□□□□□ -0.95
CD47-204ENST00000471694 TMEM260Q9NX78 707 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 HYOU1Q9Y4L1 999 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 EPB42P16452 691 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 VCLP18206 1134 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 TWF1Q12792 350 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 PKN3Q6P5Z2 889 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 MTG1Q9BT17 334 aaPredicted RBP9.14□□□□□ -0.95
CD47-204ENST00000471694 MIR1-1HGQ9H1L0 117 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 EXO5Q9H790 373 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 SYTL2Q9HCH5 934 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 MSH2P43246 934 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 PPP1R18Q6NYC8 613 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 APOA5Q6Q788 366 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 NECAB2Q7Z6G3 386 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 RABGGTAQ92696 567 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 AGO2Q9UKV8 859 aaKnown RBP9.14□□□□□ -0.95
CD47-204ENST00000471694 SNX9Q9Y5X1 595 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 CLIC4Q9Y696 253 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 ZNF827Q17R98 1081 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 SPATA18Q8TC71 538 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 VCX3AQ9NNX9 186 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 SH3GLB2Q9NR46 395 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 PPP2R3BQ9Y5P8 575 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 SH2B2O14492 632 aaPredicted RBP9.13□□□□□ -0.95
CD47-204ENST00000471694 NMT2O60551 498 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 TBXAS1P24557 533 aaPredicted RBP9.13□□□□□ -0.95
CD47-204ENST00000471694 CENPAP49450 140 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 NOGQ13253 232 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 IKBKEQ14164 716 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 HDXQ7Z353 690 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 TMEM35BQ8NCS4 154 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 SLC26A7Q8TE54 656 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 SCG3Q8WXD2 468 aaKnown RBP9.13□□□□□ -0.95
CD47-204ENST00000471694 NCLNQ969V3 563 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 SAAL1Q96ER3 474 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 SAMSN1Q9NSI8 373 aaKnown RBP9.13□□□□□ -0.95
CD47-204ENST00000471694 ARHGEF12Q9NZN5 1544 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 RPAP1Q9BWH6 1393 aaPredicted RBP9.13□□□□□ -0.95
CD47-204ENST00000471694 TOM1L1O75674 476 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 EEF1GP26641 437 aaKnown RBP9.13□□□□□ -0.95
CD47-204ENST00000471694 DUOXA2Q1HG44 320 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 GLE1Q53GS7 698 aaKnown RBP9.13□□□□□ -0.95
CD47-204ENST00000471694 P2RX5Q93086 422 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 NPC1L1Q9UHC9 1359 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 DYRK3O43781 588 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 LIG3P49916 1009 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 HSD17B4P51659 736 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 ZNF75DP51815 510 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 ADKP55263 362 aaKnown RBP9.13□□□□□ -0.95
CD47-204ENST00000471694 TPI1P60174 286 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 GPD1LQ8N335 351 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 FAM133AQ8N9E0 248 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 OR8K1Q8NGG5 319 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 TTC8Q8TAM2 541 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 KLC2Q9H0B6 622 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 KIF24Q5T7B8 1368 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 KIF3CO14782 793 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 PGK2P07205 417 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 KRT71Q3SY84 523 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 MAP3K21Q5TCX8 1036 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 RD3Q7Z3Z2 195 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 ZNF438Q7Z4V0 828 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 C10orf67Q8IYJ2 551 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 ARHGAP18Q8N392 663 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 CARNMT1Q8N4J0 409 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 GBP7Q8N8V2 638 aaPredicted RBP9.13□□□□□ -0.95
CD47-204ENST00000471694 TRIM58Q8NG06 486 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 SNX21Q969T3 373 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 MROH8Q9H579 483 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 SENP2Q9HC62 589 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 DAGLAQ9Y4D2 1042 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 POLRMTO00411 1230 aaKnown RBP9.13□□□□□ -0.95
CD47-204ENST00000471694 HBP1O60381 514 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 PSMC1P62191 440 aaKnown RBP9.13□□□□□ -0.95
CD47-204ENST00000471694 RBP5P82980 135 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms