RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MAPK6Q16659 721 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 AMHR2Q16671 573 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 TRAF7Q6Q0C0 670 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 SRGAP1Q7Z6B7 1085 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 DHX40Q8IX18 779 aaKnown RBP21.07■□□□□ 0.96
PSPC1-203ENST00000471658 AOPEPQ8N6M6 819 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 HVCN1Q96D96 273 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 DUSP9Q99956 384 aaKnown RBP21.07■□□□□ 0.96
PSPC1-203ENST00000471658 TARS2Q9BW92 718 aaKnown RBP21.07■□□□□ 0.96
PSPC1-203ENST00000471658 MROH7Q68CQ1 1323 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 DCDC2CA8MYV0 355 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 M0QZ92 97 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 TLR3O15455 904 aaKnown RBP21.07■□□□□ 0.96
PSPC1-203ENST00000471658 EIF4BP23588 611 aaKnown RBP21.07■□□□□ 0.96
PSPC1-203ENST00000471658 PPP1R2P41236 205 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 ZCWPW2Q504Y3 356 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 TTI2Q6NXR4 508 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 SLC39A4Q6P5W5 647 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 LUZP1Q86V48 1076 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 EEF2KMTQ96G04 330 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 TOX2Q96NM4 488 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 NAT10Q9H0A0 1025 aaKnown RBP21.07■□□□□ 0.96
PSPC1-203ENST00000471658 TMEM206Q9H813 350 aa21.07■□□□□ 0.96
PSPC1-203ENST00000471658 NOC2LQ9Y3T9 749 aaKnown RBP21.07■□□□□ 0.96
PSPC1-203ENST00000471658 UMODL1Q5DID0 1318 aa21.06■□□□□ 0.96
PSPC1-203ENST00000471658 NCAPHQ15003 741 aa21.06■□□□□ 0.96
PSPC1-203ENST00000471658 CT47A1Q5JQC4 288 aaPredicted RBP21.06■□□□□ 0.96
PSPC1-203ENST00000471658 FAM26DQ5JW98 314 aa21.06■□□□□ 0.96
PSPC1-203ENST00000471658 CDR2LQ86X02 465 aaPredicted RBP21.06■□□□□ 0.96
PSPC1-203ENST00000471658 BICD1Q96G01 975 aa21.06■□□□□ 0.96
PSPC1-203ENST00000471658 ZBTB45Q96K62 511 aaPredicted RBP21.06■□□□□ 0.96
PSPC1-203ENST00000471658 BPIFA3Q9BQP9 254 aa21.06■□□□□ 0.96
PSPC1-203ENST00000471658 GBP3Q9H0R5 595 aa21.06■□□□□ 0.96
PSPC1-203ENST00000471658 TYW1Q9NV66 732 aaKnown RBP21.06■□□□□ 0.96
PSPC1-203ENST00000471658 ACKR2O00590 384 aa21.05■□□□□ 0.96
PSPC1-203ENST00000471658 ENOX1Q8TC92 643 aaKnown RBP21.05■□□□□ 0.96
PSPC1-203ENST00000471658 FAM200AQ8TCP9 573 aa21.05■□□□□ 0.96
PSPC1-203ENST00000471658 CPB2Q96IY4 423 aa21.05■□□□□ 0.96
PSPC1-203ENST00000471658 EXOC7Q9UPT5 735 aa21.05■□□□□ 0.96
PSPC1-203ENST00000471658 TRAF3IP3Q9Y228 551 aa21.05■□□□□ 0.96
PSPC1-203ENST00000471658 MKI67P46013 3256 aaKnown RBP21.05■□□□□ 0.96
PSPC1-203ENST00000471658 SIP14410 1827 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 PDXKO00764 312 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 RPLP2P05387 115 aaKnown RBP21.04■□□□□ 0.96
PSPC1-203ENST00000471658 FAM187BQ17R55 369 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 CATSPER4Q7RTX7 472 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 FAM228AQ86W67 206 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 ACO2Q99798 780 aaKnown RBP21.04■□□□□ 0.96
PSPC1-203ENST00000471658 PCIF1Q9H4Z3 704 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 AGPAT3Q9NRZ7 376 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 PRMT7Q9NVM4 692 aaPredicted RBP21.04■□□□□ 0.96
PSPC1-203ENST00000471658 PCDH10Q9P2E7 1040 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 TSPAN1O60635 241 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 SCP2P22307 547 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 ADSSP30520 456 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 ABCD1P33897 745 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 LIG4P49917 911 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 MYL5Q02045 173 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 RBL2Q08999 1139 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 PRPF4BQ13523 1007 aaKnown RBP21.04■□□□□ 0.96
PSPC1-203ENST00000471658 MBTPS1Q14703 1052 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 FBXO47Q5MNV8 452 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 PPP4R3CPQ6ZMV5 832 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 ZNF710Q8N1W2 664 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 ZSWIM2Q8NEG5 633 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 CAGE1Q8TC20 777 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 CBWD1Q9BRT8 395 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 NOC4LQ9BVI4 516 aaKnown RBP21.04■□□□□ 0.96
PSPC1-203ENST00000471658 MRPL4Q9BYD3 311 aaKnown RBP21.04■□□□□ 0.96
PSPC1-203ENST00000471658 HAPLN2Q9GZV7 340 aa21.04■□□□□ 0.96
PSPC1-203ENST00000471658 AGO3Q9H9G7 860 aaKnown RBP21.04■□□□□ 0.96
PSPC1-203ENST00000471658 BICDL2A1A5D9 508 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 HNRNPDLO14979 420 aaKnown RBP21.03■□□□□ 0.96
PSPC1-203ENST00000471658 CALUO43852 315 aaPredicted RBP21.03■□□□□ 0.96
PSPC1-203ENST00000471658 CAND2O75155 1236 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 PIGRP01833 764 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 GHRP10912 638 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 ARF4P18085 180 aaPredicted RBP21.03■□□□□ 0.96
PSPC1-203ENST00000471658 BFSP2Q13515 415 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 LPIN1Q14693 890 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 HSP90AA4PQ58FG1 418 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 SPATA1Q5VX52 437 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 EEF1DP3Q658K8 133 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 TSG101Q99816 390 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 SRRTQ9BXP5 876 aaKnown RBP21.03■□□□□ 0.96
PSPC1-203ENST00000471658 PPP1R12CQ9BZL4 782 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 SAMSN1Q9NSI8 373 aaKnown RBP21.03■□□□□ 0.96
PSPC1-203ENST00000471658 FANCLQ9NW38 375 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 NFE2L3Q9Y4A8 694 aa21.03■□□□□ 0.96
PSPC1-203ENST00000471658 CCDC85CA6NKD9 419 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 RPS6KA5O75582 802 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 ERLIN2O94905 339 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 CAVIN2O95810 425 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 SELPP16109 830 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 HOXA11P31270 313 aaPredicted RBP21.02■□□□□ 0.96
PSPC1-203ENST00000471658 LRRC63Q05C16 580 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 TMEM132AQ24JP5 1023 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 LRRC8DQ7L1W4 858 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 HS2ST1Q7LGA3 356 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 HSD3B7Q9H2F3 369 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms