RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 U2AF2P26368 475 aaKnown RBP eCLIP15□□□□□ -0.01
HMGN1-211ENST00000471260 RPA1P27694 616 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 SSTR3P32745 418 aaPredicted RBP15□□□□□ -0.01
HMGN1-211ENST00000471260 ARL2P36404 184 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 BCAR1P56945 870 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 ZP2Q05996 745 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 NOMO2Q5JPE7 1267 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 CATSPER3Q86XQ3 398 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 TMEM169Q96HH4 297 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 NACC1Q96RE7 527 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 ENTPD7Q9NQZ7 604 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 BMP2KQ9NSY1 1161 aaPredicted RBP15□□□□□ -0.01
HMGN1-211ENST00000471260 DBR1Q9UK59 544 aaKnown RBP15□□□□□ -0.01
HMGN1-211ENST00000471260 NOL7Q9UMY1 257 aaKnown RBP15□□□□□ -0.01
HMGN1-211ENST00000471260 STK24Q9Y6E0 443 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 GLP2RO95838 553 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 NCLP19338 710 aaKnown RBP14.99□□□□□ -0.01
HMGN1-211ENST00000471260 TECP42680 631 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 RNASELQ05823 741 aaKnown RBP14.99□□□□□ -0.01
HMGN1-211ENST00000471260 KCNC3Q14003 757 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 GIT2Q14161 759 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 ZNF174Q15697 407 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 TTC38Q5R3I4 469 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 HAUS3Q68CZ6 603 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 NOTUMQ6P988 496 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 TMC7Q7Z402 723 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 MCPH1Q8NEM0 835 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 URGCPQ8TCY9 931 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 PIGOQ8TEQ8 1089 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 EPHX3Q9H6B9 360 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 RSAD1Q9HA92 442 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 TBC1D13Q9NVG8 400 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 ARID2Q68CP9 1835 aa14.99□□□□□ -0.01
HMGN1-211ENST00000471260 INO80B-WBP1J3KQ70 363 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 PER2O15055 1255 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 GPR37L1O60883 481 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 ZC3H11AO75152 810 aaKnown RBP eCLIP14.98□□□□□ -0.01
HMGN1-211ENST00000471260 PBX3P40426 434 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 FXR2P51116 673 aaKnown RBP eCLIP14.98□□□□□ -0.01
HMGN1-211ENST00000471260 PDIA5Q14554 519 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 SMC1AQ14683 1233 aaKnown RBP14.98□□□□□ -0.01
HMGN1-211ENST00000471260 UBXN11Q5T124 520 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 PLPP4Q5VZY2 271 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 AGMOQ6ZNB7 445 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 MRPL43Q8N983 215 aaKnown RBP14.98□□□□□ -0.01
HMGN1-211ENST00000471260 LPPQ93052 612 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 RAB34Q9BZG1 259 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 NRDE2Q9H7Z3 1164 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 PCDHGC5Q9Y5F6 944 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 IRAK3Q9Y616 596 aa14.98□□□□□ -0.01
HMGN1-211ENST00000471260 LAD1O00515 517 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 INPPL1O15357 1258 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 TSPAN1O60635 241 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 MED24O75448 989 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 GALTP07902 379 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 HOXB8P17481 243 aaPredicted RBP14.97□□□□□ -0.01
HMGN1-211ENST00000471260 COL9A1P20849 921 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 GLRA2P23416 452 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 MCM2P49736 904 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 MBTD1Q05BQ5 628 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 CAPSQ13938 189 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 CLUL1Q15846 466 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 TMEM31Q5JXX7 168 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 L1TD1Q5T7N2 865 aaKnown RBP14.97□□□□□ -0.01
HMGN1-211ENST00000471260 DDX53Q86TM3 631 aaKnown RBP14.97□□□□□ -0.01
HMGN1-211ENST00000471260 HACE1Q8IYU2 909 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 ASAP3Q8TDY4 903 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 KHSRPQ92945 711 aaKnown RBP eCLIP14.97□□□□□ -0.015e-7■□□□□ 9.7
HMGN1-211ENST00000471260 IGSF21Q96ID5 467 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 PRIMPOLQ96LW4 560 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 TMEM175Q9BSA9 504 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 CSRNP2Q9H175 543 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 BARX2Q9UMQ3 279 aaPredicted RBP14.97□□□□□ -0.01
HMGN1-211ENST00000471260 INPP5FQ9Y2H2 1132 aa14.97□□□□□ -0.01
HMGN1-211ENST00000471260 C2orf71A6NGG8 1288 aa14.96□□□□□ -0.01
HMGN1-211ENST00000471260 MEIS3P2A8K0S8 358 aa14.96□□□□□ -0.01
HMGN1-211ENST00000471260 HIDE1A8MVS5 230 aa14.96□□□□□ -0.01
HMGN1-211ENST00000471260 NT5C1B-RDH14C9J2C7 533 aa14.96□□□□□ -0.01
HMGN1-211ENST00000471260 USO1O60763 962 aaKnown RBP14.96□□□□□ -0.01
HMGN1-211ENST00000471260 ALDH2P05091 517 aa14.96□□□□□ -0.01
HMGN1-211ENST00000471260 ITGA4P13612 1032 aa14.96□□□□□ -0.01
HMGN1-211ENST00000471260 AMHR2Q16671 573 aa14.96□□□□□ -0.01
HMGN1-211ENST00000471260 LONRF3Q496Y0 759 aa14.96□□□□□ -0.01
HMGN1-211ENST00000471260 C4orf32Q8N8J7 132 aa14.96□□□□□ -0.01
HMGN1-211ENST00000471260 CASP10Q92851 521 aa14.96□□□□□ -0.01
HMGN1-211ENST00000471260 FAM193BQ96PV7 902 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-211ENST00000471260 POLR3FQ9H1D9 316 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-211ENST00000471260 GIT1Q9Y2X7 761 aa14.96□□□□□ -0.01
HMGN1-211ENST00000471260 IPPQ9Y573 584 aa14.96□□□□□ -0.01
HMGN1-211ENST00000471260 A0A1B0GUA9 196 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 DCXO43602 365 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 CTSAP10619 480 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 ARF4P18085 180 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-211ENST00000471260 CYP11B2P19099 503 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 FAM187BQ17R55 369 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 ANKRD54Q6NXT1 300 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 PPP4R3CPQ6ZMV5 832 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 ZNF280BQ86YH2 543 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 VPS52Q8N1B4 723 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 SMG8Q8ND04 991 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms