RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 SPIDRQ14159 915 aa7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 UBE3CQ15386 1083 aa7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 ELAVL1Q15717 326 aaKnown RBP7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 EGFLAMQ63HQ2 1017 aa7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 ABHD15Q6UXT9 468 aa7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 HTR3DQ70Z44 454 aa7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 C11orf74Q86VG3 221 aa7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 USP7Q93009 1102 aa7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 MIEF2Q96C03 454 aa7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 EAF2Q96CJ1 260 aaPredicted RBP7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 ING1Q9UK53 422 aaPredicted RBP7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 NOC2LQ9Y3T9 749 aaKnown RBP7.08□□□□□ -1.28
PRPF40A-206ENST00000471167 XDHP47989 1333 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 WNT10BO00744 389 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 CASRP41180 1078 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 GPR15P49685 360 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 LGALS4P56470 323 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 PPARAQ07869 468 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 MGAT5Q09328 741 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 KLF10Q13118 480 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 MAN2A1Q16706 1144 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 FKBP15Q5T1M5 1219 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 ZFPM1Q8IX07 1006 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 TTC1Q99614 292 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 KCTD10Q9H3F6 313 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 GIT1Q9Y2X7 761 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 HS3ST3A1Q9Y663 406 aa7.07□□□□□ -1.28
PRPF40A-206ENST00000471167 HOXA3O43365 443 aaPredicted RBP7.06□□□□□ -1.28
PRPF40A-206ENST00000471167 PTH1RQ03431 593 aa7.06□□□□□ -1.28
PRPF40A-206ENST00000471167 TOB2Q14106 344 aaPredicted RBP7.06□□□□□ -1.28
PRPF40A-206ENST00000471167 STAT4Q14765 748 aa7.06□□□□□ -1.28
PRPF40A-206ENST00000471167 KRT40Q6A162 431 aa7.06□□□□□ -1.28
PRPF40A-206ENST00000471167 THEMISQ8N1K5 641 aaPredicted RBP7.06□□□□□ -1.28
PRPF40A-206ENST00000471167 MDGA1Q8NFP4 955 aa7.06□□□□□ -1.28
PRPF40A-206ENST00000471167 WNT8AQ9H1J5 351 aa7.06□□□□□ -1.28
PRPF40A-206ENST00000471167 NCDNQ9UBB6 729 aa7.06□□□□□ -1.28
PRPF40A-206ENST00000471167 RCAN3Q9UKA8 241 aa7.06□□□□□ -1.28
PRPF40A-206ENST00000471167 CDY2AQ9Y6F7 541 aa7.06□□□□□ -1.28
PRPF40A-206ENST00000471167 ST20-MTHFSA0A0A6YYL1 179 aa7.05□□□□□ -1.28
PRPF40A-206ENST00000471167 HHEXQ03014 270 aa7.05□□□□□ -1.28
PRPF40A-206ENST00000471167 CCDC178Q5BJE1 867 aa7.05□□□□□ -1.28
PRPF40A-206ENST00000471167 HDGFL2Q7Z4V5 671 aaPredicted RBP7.05□□□□□ -1.28
PRPF40A-206ENST00000471167 LMBR1Q8WVP7 490 aa7.05□□□□□ -1.28
PRPF40A-206ENST00000471167 SORCS2Q96PQ0 1159 aa7.05□□□□□ -1.28
PRPF40A-206ENST00000471167 PLEKHG4BQ96PX9 1271 aa7.05□□□□□ -1.28
PRPF40A-206ENST00000471167 ORAI2Q96SN7 254 aa7.05□□□□□ -1.28
PRPF40A-206ENST00000471167 LSM14BQ9BX40 385 aaKnown RBP7.05□□□□□ -1.28
PRPF40A-206ENST00000471167 CPEB1Q9BZB8 566 aaKnown RBP7.05□□□□□ -1.28
PRPF40A-206ENST00000471167 PCED1AQ9H1Q7 454 aa7.05□□□□□ -1.28
PRPF40A-206ENST00000471167 MAFGO15525 162 aa7.04□□□□□ -1.28
PRPF40A-206ENST00000471167 FZD7O75084 574 aa7.04□□□□□ -1.28
PRPF40A-206ENST00000471167 SESN3P58005 492 aa7.04□□□□□ -1.28
PRPF40A-206ENST00000471167 MRPL49Q13405 166 aaKnown RBP7.04□□□□□ -1.28
PRPF40A-206ENST00000471167 FSCN1Q16658 493 aaKnown RBP7.04□□□□□ -1.28
PRPF40A-206ENST00000471167 LSM12Q3MHD2 195 aaKnown RBP7.04□□□□□ -1.28
PRPF40A-206ENST00000471167 KRT26Q7Z3Y9 468 aa7.04□□□□□ -1.28
PRPF40A-206ENST00000471167 ANKRD35Q8N283 1001 aa7.04□□□□□ -1.28
PRPF40A-206ENST00000471167 OR14C36Q8NHC7 312 aa7.04□□□□□ -1.28
PRPF40A-206ENST00000471167 TSPEARQ8WU66 669 aa7.04□□□□□ -1.28
PRPF40A-206ENST00000471167 CHAC2Q8WUX2 184 aa7.04□□□□□ -1.28
PRPF40A-206ENST00000471167 EIF5BO60841 1220 aaKnown RBP7.03□□□□□ -1.28
PRPF40A-206ENST00000471167 NR4A1P22736 598 aa7.03□□□□□ -1.28
PRPF40A-206ENST00000471167 ZFP36P26651 326 aaKnown RBP7.03□□□□□ -1.28
PRPF40A-206ENST00000471167 NPEPPSP55786 919 aa7.03□□□□□ -1.28
PRPF40A-206ENST00000471167 Q6ZPA2 131 aa7.03□□□□□ -1.28
PRPF40A-206ENST00000471167 KCNK18Q7Z418 384 aa7.03□□□□□ -1.28
PRPF40A-206ENST00000471167 RSAD2Q8WXG1 361 aa7.03□□□□□ -1.28
PRPF40A-206ENST00000471167 PGBD4Q96DM1 585 aa7.03□□□□□ -1.28
PRPF40A-206ENST00000471167 MNTQ99583 582 aa7.03□□□□□ -1.28
PRPF40A-206ENST00000471167 ZNF341Q9BYN7 854 aa7.03□□□□□ -1.28
PRPF40A-206ENST00000471167 GPRC5BQ9NZH0 403 aa7.03□□□□□ -1.28
PRPF40A-206ENST00000471167 APOBEC2Q9Y235 224 aaKnown RBP7.03□□□□□ -1.28
PRPF40A-206ENST00000471167 RAB11FIP3O75154 756 aa7.02□□□□□ -1.29
PRPF40A-206ENST00000471167 ENPP1P22413 925 aa7.02□□□□□ -1.29
PRPF40A-206ENST00000471167 CTSSP25774 331 aa7.02□□□□□ -1.29
PRPF40A-206ENST00000471167 SOX5P35711 763 aa7.02□□□□□ -1.29
PRPF40A-206ENST00000471167 NAIF1Q69YI7 327 aaPredicted RBP7.02□□□□□ -1.29
PRPF40A-206ENST00000471167 GPRIN1Q7Z2K8 1008 aa7.02□□□□□ -1.29
PRPF40A-206ENST00000471167 MB21D1Q8N884 522 aa7.02□□□□□ -1.29
PRPF40A-206ENST00000471167 TGFBRAP1Q8WUH2 860 aa7.02□□□□□ -1.29
PRPF40A-206ENST00000471167 GPR87Q9BY21 358 aa7.02□□□□□ -1.29
PRPF40A-206ENST00000471167 SLC2A4RGQ9NR83 387 aa7.02□□□□□ -1.29
PRPF40A-206ENST00000471167 TRPS1Q9UHF7 1281 aa7.02□□□□□ -1.29
PRPF40A-206ENST00000471167 ZMYM3Q14202 1370 aa7.02□□□□□ -1.29
PRPF40A-206ENST00000471167 ULK1O75385 1050 aa7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 PRKD3O94806 890 aa7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 LTA4HP09960 611 aaKnown RBP7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 MAN2A2P49641 1150 aa7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 UGT8Q16880 541 aa7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 COG1Q8WTW3 980 aa7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 ATXN2LQ8WWM7 1075 aaKnown RBP7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 ST8SIA2Q92186 375 aa7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 CSRNP2Q9H175 543 aa7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 MMRN2Q9H8L6 949 aa7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 AURKAIP1Q9NWT8 199 aaPredicted RBP7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 DPP7Q9UHL4 492 aa7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 SCOCQ9UIL1 159 aa7.01□□□□□ -1.29
PRPF40A-206ENST00000471167 CYR61O00622 381 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 CYP27B1O15528 508 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms