RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 KCNV1Q6PIU1 500 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 ZNF852Q6ZMS4 543 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 GET4Q7L5D6 327 aaPredicted RBP6.73□□□□□ -1.33
VARS-222ENST00000470953 CACNA2D4Q7Z3S7 1137 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 RSPH3Q86UC2 560 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 TICAM2Q86XR7 235 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 VPS52Q8N1B4 723 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 RUFY2Q8WXA3 655 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 STAMQ92783 540 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 VN1R3Q9BXE9 311 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 CELF4Q9BZC1 486 aaKnown RBP6.73□□□□□ -1.33
VARS-222ENST00000470953 ZBP1Q9H171 429 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 RNF41Q9H4P4 317 aaPredicted RBP6.73□□□□□ -1.33
VARS-222ENST00000470953 C2orf42Q9NWW7 574 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 NOC2LQ9Y3T9 749 aaKnown RBP6.73□□□□□ -1.33
VARS-222ENST00000470953 TRPV2Q9Y5S1 764 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 SQORQ9Y6N5 450 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 ZMYM6O95789 1325 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 NAV3Q8IVL0 2385 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 C2CD2LO14523 706 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 SNHG28P0DPA3 235 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 TOP1P11387 765 aaKnown RBP6.72□□□□□ -1.33
VARS-222ENST00000470953 RDXP35241 583 aaKnown RBP6.72□□□□□ -1.33
VARS-222ENST00000470953 PPM1AP35813 382 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 HSD17B4P51659 736 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 CLCN4P51793 760 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 FAM189BP81408 668 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 IMMTQ16891 758 aaKnown RBP6.72□□□□□ -1.33
VARS-222ENST00000470953 QRICH1Q2TAL8 776 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 TAF1BQ53T94 588 aaPredicted RBP6.72□□□□□ -1.33
VARS-222ENST00000470953 VPS53Q5VIR6 699 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 IER5Q5VY09 327 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 METTL7BQ6UX53 244 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 MFSD6Q6ZSS7 791 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 STOX1Q6ZVD7 989 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 SLC24A5Q71RS6 500 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 PRICKLE2Q7Z3G6 844 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 ZNF589Q86UQ0 364 aaPredicted RBP6.72□□□□□ -1.33
VARS-222ENST00000470953 WDR5BQ86VZ2 330 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 TRAPPC12Q8WVT3 735 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 LIN37Q96GY3 246 aaPredicted RBP6.72□□□□□ -1.33
VARS-222ENST00000470953 ANP32EQ9BTT0 268 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 TMEM117Q9H0C3 514 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 OSBPL3Q9H4L5 887 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 ATP6V0A4Q9HBG4 840 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 HEBP1Q9NRV9 189 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 PNMA2Q9UL42 364 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 ZNF215Q9UL58 517 aaPredicted RBP6.72□□□□□ -1.33
VARS-222ENST00000470953 ST3GAL5Q9UNP4 418 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 ABCB11O95342 1321 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 ATG2BQ96BY7 2078 aa6.72□□□□□ -1.33
VARS-222ENST00000470953 PCNX1Q96RV3 2341 aa6.71□□□□□ -1.33
VARS-222ENST00000470953 CCDC195A0A1B0GUA6 201 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 TEX51A0A1B0GUA7 166 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 DENND3A2RUS2 1198 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 SPATA31C2B4DYI2 1134 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 ZNF213O14771 459 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 RFPL2O75678 378 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 RPP40O75818 363 aaKnown RBP6.71□□□□□ -1.34
VARS-222ENST00000470953 CAVIN2O95810 425 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 CTSAP10619 480 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 PCP11498 1178 aaKnown RBP6.71□□□□□ -1.34
VARS-222ENST00000470953 INSRRP14616 1297 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 CR2P20023 1033 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 BCAR1P56945 870 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 MRPS9P82933 396 aaKnown RBP6.71□□□□□ -1.34
VARS-222ENST00000470953 ZNF423Q2M1K9 1284 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 CLLU1OSQ5K130 101 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 CASC1Q6TDU7 716 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 PIP4P1Q86T03 277 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 IQCA1Q86XH1 822 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 MCF2L2Q86YR7 1114 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 ADGRF4Q8IZF3 695 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 PNPLA1Q8N8W4 532 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 TMEM87AQ8NBN3 555 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 GAB3Q8WWW8 586 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 ESR2Q92731 530 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 ZNF707Q96C28 371 aaPredicted RBP6.71□□□□□ -1.34
VARS-222ENST00000470953 UBAC1Q9BSL1 405 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 IER2Q9BTL4 223 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 MAF1Q9H063 256 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 FZD8Q9H461 694 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 ZNF768Q9H5H4 540 aaKnown RBP6.71□□□□□ -1.34
VARS-222ENST00000470953 LMAN1LQ9HAT1 526 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 C1orf112Q9NSG2 853 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 TMEM161AQ9NX61 479 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 RTEL1Q9NZ71 1219 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 GINS2Q9Y248 185 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 MRPS17Q9Y2R5 130 aaKnown RBP6.71□□□□□ -1.34
VARS-222ENST00000470953 IRAK3Q9Y616 596 aa6.71□□□□□ -1.34
VARS-222ENST00000470953 PTPRBP23467 1997 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 GSTTP1A0A1W2PQM5 241 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 PATE3B3GLJ2 98 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 ERVH48-1M5A8F1 160 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 ORC4O43929 436 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 PPP1R11O60927 126 aaPredicted RBP6.7□□□□□ -1.34
VARS-222ENST00000470953 RPS6KA5O75582 802 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 FGAP02671 866 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 SSBP05455 408 aaKnown RBP eCLIP6.7□□□□□ -1.34
VARS-222ENST00000470953 CNPP09543 421 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms