RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 ANO6Q4KMQ2 910 aa31.71■■■□□ 2.67
SOD1-203ENST00000470944 TRIM43Q96BQ3 446 aaPredicted RBP31.71■■■□□ 2.67
SOD1-203ENST00000470944 HVCN1Q96D96 273 aa31.71■■■□□ 2.67
SOD1-203ENST00000470944 ACCSQ96QU6 501 aa31.71■■■□□ 2.67
SOD1-203ENST00000470944 AGO3Q9H9G7 860 aaKnown RBP31.71■■■□□ 2.67
SOD1-203ENST00000470944 PRDM5Q9NQX1 630 aaPredicted RBP31.71■■■□□ 2.67
SOD1-203ENST00000470944 TISP43B9A030 160 aa31.7■■■□□ 2.67
SOD1-203ENST00000470944 PMS1P54277 932 aaKnown RBP31.7■■■□□ 2.67
SOD1-203ENST00000470944 ZNF445P59923 1031 aa31.7■■■□□ 2.67
SOD1-203ENST00000470944 STRN3Q13033 797 aa31.7■■■□□ 2.67
SOD1-203ENST00000470944 LPIN1Q14693 890 aa31.7■■■□□ 2.67
SOD1-203ENST00000470944 KNOP1Q1ED39 458 aaKnown RBP31.7■■■□□ 2.67
SOD1-203ENST00000470944 FAM228AQ86W67 206 aa31.7■■■□□ 2.67
SOD1-203ENST00000470944 KCTD10Q9H3F6 313 aa31.7■■■□□ 2.67
SOD1-203ENST00000470944 SEMA6BQ9H3T3 888 aa31.7■■■□□ 2.67
SOD1-203ENST00000470944 SCP2P22307 547 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 ITGB8P26012 769 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 CCL23P55773 120 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 GPNMBQ14956 572 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 LRSAM1Q6UWE0 723 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 MED15Q96RN5 788 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 TARS2Q9BW92 718 aaKnown RBP31.69■■■□□ 2.66
SOD1-203ENST00000470944 PRMT7Q9NVM4 692 aaPredicted RBP31.69■■■□□ 2.66
SOD1-203ENST00000470944 UBE4BO95155 1302 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 ALPK3Q96L96 1907 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 ACKR2O00590 384 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 TGFB1I1O43294 461 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 TSPAN1O60635 241 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 FAM187BQ17R55 369 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 SCLYQ96I15 445 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 CTNND2Q9UQB3 1225 aa31.69■■■□□ 2.66
SOD1-203ENST00000470944 SLC39A4Q6P5W5 647 aa31.68■■■□□ 2.66
SOD1-203ENST00000470944 PPP4R3CPQ6ZMV5 832 aa31.68■■■□□ 2.66
SOD1-203ENST00000470944 CATSPER4Q7RTX7 472 aa31.68■■■□□ 2.66
SOD1-203ENST00000470944 SYCP3Q8IZU3 236 aa31.68■■■□□ 2.66
SOD1-203ENST00000470944 TMEM206Q9H813 350 aa31.68■■■□□ 2.66
SOD1-203ENST00000470944 TRIM49BA6NDI0 452 aa31.67■■■□□ 2.66
SOD1-203ENST00000470944 ANKRD63C9JTQ0 380 aa31.67■■■□□ 2.66
SOD1-203ENST00000470944 RPS6KA5O75582 802 aa31.67■■■□□ 2.66
SOD1-203ENST00000470944 ABCD1P33897 745 aa31.67■■■□□ 2.66
SOD1-203ENST00000470944 STX17P56962 302 aa31.67■■■□□ 2.66
SOD1-203ENST00000470944 PRPF4BQ13523 1007 aaKnown RBP31.67■■■□□ 2.66
SOD1-203ENST00000470944 STIM1Q13586 685 aa31.67■■■□□ 2.66
SOD1-203ENST00000470944 NELFBQ8WX92 580 aa31.67■■■□□ 2.66
SOD1-203ENST00000470944 DHTKD1Q96HY7 919 aaPredicted RBP31.67■■■□□ 2.66
SOD1-203ENST00000470944 PSMA7O14818 248 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 KIAA0355O15063 1070 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 NBNO60934 754 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 KIF20AO95235 890 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 SFPQP23246 707 aaKnown RBP eCLIP31.66■■■□□ 2.66
SOD1-203ENST00000470944 CD52P31358 61 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 CDR2LQ86X02 465 aaPredicted RBP31.66■■■□□ 2.66
SOD1-203ENST00000470944 BICD1Q96G01 975 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 CPB2Q96IY4 423 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 MRPL4Q9BYD3 311 aaKnown RBP31.66■■■□□ 2.66
SOD1-203ENST00000470944 ST3GAL5Q9UNP4 418 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 CNTNAP2Q9UHC6 1331 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 HNRNPDLO14979 420 aaKnown RBP31.66■■■□□ 2.66
SOD1-203ENST00000470944 ERLIN2O94905 339 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 ARF4P18085 180 aaPredicted RBP31.66■■■□□ 2.66
SOD1-203ENST00000470944 ZCWPW2Q504Y3 356 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 CENPPQ6IPU0 288 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 PRIMPOLQ96LW4 560 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 GBP3Q9H0R5 595 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 PADI3Q9ULW8 664 aa31.66■■■□□ 2.66
SOD1-203ENST00000470944 HOXA11P31270 313 aaPredicted RBP31.65■■■□□ 2.66
SOD1-203ENST00000470944 PAK1Q13153 545 aa31.65■■■□□ 2.66
SOD1-203ENST00000470944 TSHZ1Q6ZSZ6 1077 aa31.65■■■□□ 2.66
SOD1-203ENST00000470944 C7orf61Q8IZ16 206 aa31.65■■■□□ 2.66
SOD1-203ENST00000470944 P2RX5Q93086 422 aa31.65■■■□□ 2.66
SOD1-203ENST00000470944 ACO2Q99798 780 aaKnown RBP31.65■■■□□ 2.66
SOD1-203ENST00000470944 DACH1Q9UI36 760 aa31.65■■■□□ 2.66
SOD1-203ENST00000470944 EXOC7Q9UPT5 735 aa31.65■■■□□ 2.66
SOD1-203ENST00000470944 PIGRP01833 764 aa31.64■■■□□ 2.66
SOD1-203ENST00000470944 PPP1R2P41236 205 aa31.64■■■□□ 2.66
SOD1-203ENST00000470944 NFX1Q12986 1120 aaKnown RBP31.64■■■□□ 2.66
SOD1-203ENST00000470944 ANKRD40Q6AI12 368 aa31.64■■■□□ 2.66
SOD1-203ENST00000470944 ZBTB45Q96K62 511 aaPredicted RBP31.64■■■□□ 2.66
SOD1-203ENST00000470944 AGPAT5Q9NUQ2 364 aa31.64■■■□□ 2.66
SOD1-203ENST00000470944 CCNE1P24864 410 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 ADSSP30520 456 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 LIG4P49917 911 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 ERVK-5Q9HDB9 667 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 AGPAT3Q9NRZ7 376 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 SQORQ9Y6N5 450 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 TIMP1P01033 207 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 PAK2Q13177 524 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 ATF7IP2Q5U623 682 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 EEF1DP3Q658K8 133 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 ZPBP2Q6X784 338 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 HTATIP2Q9BUP3 242 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 HAPLN2Q9GZV7 340 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 TSPY26PQ9H489 355 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 TYW1Q9NV66 732 aaKnown RBP31.63■■■□□ 2.65
SOD1-203ENST00000470944 RWDD2AQ9UIY3 292 aa31.63■■■□□ 2.65
SOD1-203ENST00000470944 PDXKO00764 312 aa31.62■■■□□ 2.65
SOD1-203ENST00000470944 CLIC2O15247 247 aa31.62■■■□□ 2.65
SOD1-203ENST00000470944 ERCC5P28715 1186 aaPredicted RBP31.62■■■□□ 2.65
SOD1-203ENST00000470944 PCBP1Q15365 356 aaKnown RBP eCLIP31.62■■■□□ 2.65
SOD1-203ENST00000470944 TTI2Q6NXR4 508 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms