RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 CYP3A4P08684 503 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 SRFP11831 508 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 SFPQP23246 707 aaKnown RBP eCLIP10.27□□□□□ -0.77
CCDC171-204ENST00000470191 DNM2P50570 870 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 SETQ01105 290 aaPredicted RBP10.27□□□□□ -0.77
CCDC171-204ENST00000470191 FUT2Q10981 343 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 CREB3L3Q68CJ9 461 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 DCLRE1AQ6PJP8 1040 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 C15orf39Q6ZRI6 1047 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 PALB2Q86YC2 1186 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 SPNS2Q8IVW8 549 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 C1orf210Q8IVY1 113 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 UNC45AQ9H3U1 944 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 WDR6Q9NNW5 1121 aaKnown RBP10.27□□□□□ -0.77
CCDC171-204ENST00000470191 ARHGEF3Q9NR81 526 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 CHST12Q9NRB3 414 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 SUCLA2Q9P2R7 463 aaPredicted RBP10.27□□□□□ -0.77
CCDC171-204ENST00000470191 DOCK6Q96HP0 2047 aa10.27□□□□□ -0.77
CCDC171-204ENST00000470191 KLF18A0A0U1RQI7 1052 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 DDX11L8A8MPP1 907 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 hCG_1984214I3L0E3 225 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 TEX28O15482 410 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 GAS7O60861 476 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 KINO60870 393 aaKnown RBP10.26□□□□□ -0.77
CCDC171-204ENST00000470191 SKIP12755 728 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 GLULP15104 373 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 CDC27P30260 824 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 OR1G1P47890 313 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 AAMPQ13685 434 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 AGMOQ6ZNB7 445 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 SGMS1Q86VZ5 419 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 REXO1Q8N1G1 1221 aaKnown RBP10.26□□□□□ -0.77
CCDC171-204ENST00000470191 ZNF713Q8N859 430 aaPredicted RBP10.26□□□□□ -0.77
CCDC171-204ENST00000470191 CRYGNQ8WXF5 182 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 STAMQ92783 540 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 PGBD4Q96DM1 585 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 B3GALT6Q96L58 329 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 LSG1Q9H089 658 aaKnown RBP10.26□□□□□ -0.77
CCDC171-204ENST00000470191 GLT8D2Q9H1C3 349 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 PCDHB2Q9Y5E7 798 aa10.26□□□□□ -0.77
CCDC171-204ENST00000470191 F8W810 466 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 MSH4O15457 936 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 LILRB3O75022 631 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 GLUD1P00367 558 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 SOD2P04179 222 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 ADH1AP07327 375 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 RAB27AP51159 221 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 SNW1Q13573 536 aaKnown RBP10.25□□□□□ -0.77
CCDC171-204ENST00000470191 UBXN2BQ14CS0 331 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 LRCH2Q5VUJ6 765 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 MIER3Q7Z3K6 550 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 ZNF710Q8N1W2 664 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 SUMF1Q8NBK3 374 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 PJA1Q8NG27 643 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 CCDC136Q96JN2 1154 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 RPS6KC1Q96S38 1066 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 RPP25Q9BUL9 199 aaKnown RBP10.25□□□□□ -0.77
CCDC171-204ENST00000470191 APOL6Q9BWW8 343 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 TEKT3Q9BXF9 490 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 INO80BQ9C086 356 aaPredicted RBP10.25□□□□□ -0.77
CCDC171-204ENST00000470191 RSAD1Q9HA92 442 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 C6orf50Q9HD87 102 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 ANO2Q9NQ90 1003 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 BMP2KQ9NSY1 1161 aaPredicted RBP10.25□□□□□ -0.77
CCDC171-204ENST00000470191 SPATA6Q9NWH7 488 aaPredicted RBP10.25□□□□□ -0.77
CCDC171-204ENST00000470191 DLL3Q9NYJ7 618 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 DLGAP2Q9P1A6 1054 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 EPS15L1Q9UBC2 864 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 NUMBLQ9Y6R0 609 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 ARID2Q68CP9 1835 aa10.25□□□□□ -0.77
CCDC171-204ENST00000470191 CACNA1IQ9P0X4 2223 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 DCDC2BA2VCK2 349 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 CARNS1A5YM72 827 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 LAMTOR5O43504 91 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 SRGAP2CP0DJJ0 459 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 LAMP2P13473 410 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 RPL17P18621 184 aaKnown RBP10.24□□□□□ -0.77
CCDC171-204ENST00000470191 CD72P21854 359 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 ADD1P35611 737 aaKnown RBP10.24□□□□□ -0.77
CCDC171-204ENST00000470191 GLUD2P49448 558 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 GPC5P78333 572 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 CSTF1Q05048 431 aaKnown RBP10.24□□□□□ -0.77
CCDC171-204ENST00000470191 TARBP2Q15633 366 aaKnown RBP10.24□□□□□ -0.77
CCDC171-204ENST00000470191 PFKFB3Q16875 520 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-204ENST00000470191 VARS2Q5ST30 1063 aaKnown RBP10.24□□□□□ -0.77
CCDC171-204ENST00000470191 PLA2G4FQ68DD2 849 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 PHLDB3Q6NSJ2 640 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 ELMSAN1Q6PJG2 1045 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 CMASQ8NFW8 434 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-204ENST00000470191 RABGGTAQ92696 567 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 PHKBQ93100 1093 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 LENG9Q96B70 501 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 ZNF707Q96C28 371 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-204ENST00000470191 HERC2P3Q9BVR0 1158 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 FAM217BQ9NTX9 383 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-204ENST00000470191 MARCH5Q9NX47 278 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 USP18Q9UMW8 372 aa10.24□□□□□ -0.77
CCDC171-204ENST00000470191 EP300Q09472 2414 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-204ENST00000470191 GAS2O43903 313 aaKnown RBP10.23□□□□□ -0.77
CCDC171-204ENST00000470191 ZNF623O75123 536 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms