RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 MORC4Q8TE76 937 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 CENPTQ96BT3 561 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 VCPKMTQ9H867 229 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 ZBTB21Q9ULJ3 1066 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 NOVA2Q9UNW9 492 aaKnown RBP14.75□□□□□ -0.05
BRCA1-209ENST00000470026 PCDHA3Q9Y5H8 950 aa14.75□□□□□ -0.05
BRCA1-209ENST00000470026 PHF2O75151 1096 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 LYPLA2O95372 231 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 FTLP02792 175 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-209ENST00000470026 ITGB5P18084 799 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 PEX5P50542 639 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 GHRHRQ02643 423 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 SYCP3Q8IZU3 236 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 CD101Q93033 1021 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 ZSWIM1Q9BR11 485 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 LRRC4CQ9HCJ2 640 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 UBE2TQ9NPD8 197 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-209ENST00000470026 LARSQ9P2J5 1176 aaKnown RBP14.74□□□□□ -0.05
BRCA1-209ENST00000470026 VGLL3A8MV65 326 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 DCDC2CA8MYV0 355 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 K7ENM7 598 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 DHX15O43143 795 aaKnown RBP14.74□□□□□ -0.05
BRCA1-209ENST00000470026 RTN2O75298 545 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 LRRN2O75325 713 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 P4HBP07237 508 aaKnown RBP14.74□□□□□ -0.05
BRCA1-209ENST00000470026 GZMAP12544 262 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 CHRNA3P32297 505 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 GBP1P32455 592 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 GPC5P78333 572 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 CETN1Q12798 172 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 CYP1B1Q16678 543 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 ARMC9Q7Z3E5 817 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 KRT27Q7Z3Y8 459 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 LDHDQ86WU2 507 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 PRELID2Q8N945 189 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 FLAD1Q8NFF5 587 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 ACCSQ96QU6 501 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 PSMD1Q99460 953 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 PABPC3Q9H361 631 aaKnown RBP14.74□□□□□ -0.05
BRCA1-209ENST00000470026 CENPHQ9H3R5 247 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 CNOT10Q9H9A5 744 aaKnown RBP14.74□□□□□ -0.05
BRCA1-209ENST00000470026 GRHL1Q9NZI5 618 aa14.74□□□□□ -0.05
BRCA1-209ENST00000470026 NOCTQ9UK39 431 aaKnown RBP14.74□□□□□ -0.05
BRCA1-209ENST00000470026 YDJCA8MPS7 323 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 PLS3P13797 630 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 CHRNB2P17787 502 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 MAGOHP61326 146 aaKnown RBP14.73□□□□□ -0.05
BRCA1-209ENST00000470026 GTF2BQ00403 316 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 ZNF211Q13398 564 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-209ENST00000470026 PLCB4Q15147 1175 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 AOC3Q16853 763 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 KRT71Q3SY84 523 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 KCNV1Q6PIU1 500 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 FAM71AQ8IYT1 594 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 ZDHHC14Q8IZN3 488 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 PLEKHO2Q8TD55 490 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 FAM151AQ8WW52 585 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 KRT35Q92764 455 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 GLG1Q92896 1179 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 MAGOHBQ96A72 148 aaKnown RBP14.73□□□□□ -0.05
BRCA1-209ENST00000470026 PGM2Q96G03 612 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 PCDHB18PQ96TA0 734 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 PPANQ9NQ55 473 aaKnown RBP14.73□□□□□ -0.05
BRCA1-209ENST00000470026 TMOD4Q9NZQ9 345 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 FEM1BQ9UK73 627 aa14.73□□□□□ -0.05
BRCA1-209ENST00000470026 SPDYE2BA6NHP3 402 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 TBC1D12O60347 775 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 SPDYE6P0CI01 402 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 TMOD1P28289 359 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 RARRES1P49788 294 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 PRPF4BQ13523 1007 aaKnown RBP14.72□□□□□ -0.05
BRCA1-209ENST00000470026 BYSLQ13895 437 aaKnown RBP14.72□□□□□ -0.05
BRCA1-209ENST00000470026 HOOK3Q86VS8 718 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 RPUSD2Q8IZ73 545 aaKnown RBP14.72□□□□□ -0.05
BRCA1-209ENST00000470026 UBL4BQ8N7F7 174 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 XXYLT1Q8NBI6 393 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 RDH13Q8NBN7 331 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 RAPGEF5Q92565 580 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 CBWD1Q9BRT8 395 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 TMEM109Q9BVC6 243 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 DDX20Q9UHI6 824 aaKnown RBP14.72□□□□□ -0.05
BRCA1-209ENST00000470026 CNOT7Q9UIV1 285 aaKnown RBP14.72□□□□□ -0.05
BRCA1-209ENST00000470026 RASAL2Q9UJF2 1139 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 ATP8A1Q9Y2Q0 1164 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 CNTNAP1P78357 1384 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 PODXLO00592 558 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 HNRNPH1P31943 449 aaKnown RBP14.72□□□□□ -0.05
BRCA1-209ENST00000470026 COPB2P35606 906 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 PTGER2P43116 358 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 PMS2P54278 862 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 ACTN3Q08043 901 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-209ENST00000470026 KCTD19Q17RG1 926 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-209ENST00000470026 MIER3Q7Z3K6 550 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 EPS8L1Q8TE68 723 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 TATDN2Q93075 761 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 TIPINQ9BVW5 301 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 TRIM31Q9BZY9 425 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 WNT8AQ9H1J5 351 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 SEPT11Q9NVA2 429 aaKnown RBP14.72□□□□□ -0.05
BRCA1-209ENST00000470026 CTTNBP2NLQ9P2B4 639 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms