RNA–Protein interactions for RNA: ENST00000469882.5

FXR1-208, Transcript of FMR1 autosomal homolog 1, human

TSL 3

Gene FXR1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-208	ENST00000469882	PTGDR	Q13258	359 aa		12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	DUSP6	Q16828	381 aa		12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	MRPL10	Q7Z7H8	261 aa	Known RBP	12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	SMG8	Q8ND04	991 aa	Known RBP	12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	MICAL1	Q8TDZ2	1067 aa		12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	NACC1	Q96RE7	527 aa		12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	TCF25	Q9BQ70	676 aa		12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	NFKBIZ	Q9BYH8	718 aa		12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	NRDE2	Q9H7Z3	1164 aa		12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	TLE6	Q9H808	572 aa		12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	ENTPD7	Q9NQZ7	604 aa		12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	DNAJB4	Q9UDY4	337 aa		12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	CD207	Q9UJ71	328 aa		12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.51	□□□□□ -0.41
FXR1-208	ENST00000469882	PP2D1	A8MPX8	630 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	MBTPS2	O43462	519 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	ARF4	P18085	180 aa	Predicted RBP	12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	NCL	P19338	710 aa	Known RBP	12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	CCT6A	P40227	531 aa	Known RBP	12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	ZP2	Q05996	745 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	SMAD4	Q13485	552 aa	Known RBP	12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	PCBP1	Q15365	356 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	SMAD2	Q15796	467 aa	Known RBP	12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	IL17A	Q16552	155 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	HAUS3	Q68CZ6	603 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	CDCA2	Q69YH5	1023 aa	Predicted RBP	12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	MCTP1	Q6DN14	999 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	NOTUM	Q6P988	496 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	ZNF280B	Q86YH2	543 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	IGSF22	Q8N9C0	903 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	MCPH1	Q8NEM0	835 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	RSPH1	Q8WYR4	309 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	BSND	Q8WZ55	320 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	PGBD4	Q96DM1	585 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	CCDC51	Q96ER9	411 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	GBP3	Q9H0R5	595 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	RNF39	Q9H2S5	420 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	RSAD1	Q9HA92	442 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	LRWD1	Q9UFC0	647 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	PUF60	Q9UHX1	559 aa	Known RBP	12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	KIF3A	Q9Y496	699 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	HES2	Q9Y543	173 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	IPP	Q9Y573	584 aa		12.5	□□□□□ -0.41
FXR1-208	ENST00000469882	CNTNAP2	Q9UHC6	1331 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	ARHGEF35	A5YM69	484 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	LRRIQ4	A6NIV6	560 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	EYA4	O95677	639 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	GALT	P07902	379 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	AXL	P30530	894 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	SLC11A1	P49279	550 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	ALDH7A1	P49419	539 aa	Known RBP	12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	MCM2	P49736	904 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	KRT17	Q04695	432 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	RNASEL	Q05823	741 aa	Known RBP	12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	COASY	Q13057	564 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	KCNC3	Q14003	757 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	PDE12	Q6L8Q7	609 aa	Known RBP	12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	PADI6	Q6TGC4	694 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	CDR2L	Q86X02	465 aa	Predicted RBP	12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	GJD3	Q8N144	294 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	SMRP1	Q8NCR6	262 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	URGCP	Q8TCY9	931 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	SNX29	Q8TEQ0	813 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	IGSF21	Q96ID5	467 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	CDCA3	Q99618	268 aa	Predicted RBP	12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	VN1R3	Q9BXE9	311 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	CSRNP2	Q9H175	543 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	NXF3	Q9H4D5	531 aa	Known RBP	12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	EPHX3	Q9H6B9	360 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	NGRN	Q9NPE2	291 aa	Known RBP	12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	FAM50B	Q9Y247	325 aa		12.49	□□□□□ -0.41
FXR1-208	ENST00000469882	TTLL13P	A6NNM8	815 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882		H3BQV1	296 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	DDHD2	O94830	711 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	POMC	P01189	267 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	ITGA4	P13612	1032 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	CYP11B2	P19099	503 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	MUT	P22033	750 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	SSTR3	P32745	418 aa	Predicted RBP	12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	MLH1	P40692	756 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	PRPH	P41219	470 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	PDIA5	Q14554	519 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	SMC1A	Q14683	1233 aa	Known RBP	12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	LLGL2	Q6P1M3	1020 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	TMC7	Q7Z402	723 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	ADHFE1	Q8IWW8	467 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	AUTS2	Q8WXX7	1259 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	TMEM169	Q96HH4	297 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	MMTAG2	Q9BU76	263 aa	Known RBP	12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	APOL6	Q9BWW8	343 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	ZBP1	Q9H171	429 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	BHMT2	Q9H2M3	363 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	POLD4	Q9HCU8	107 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	DDX19A	Q9NUU7	478 aa	Known RBP	12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	PRKAG3	Q9UGI9	489 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	KIAA1024	Q9UPX6	916 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	SMC3	Q9UQE7	1217 aa		12.48	□□□□□ -0.41
FXR1-208	ENST00000469882	TDRD15	B5MCY1	1934 aa	Known RBP	12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms