RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 C4orf19Q8IY42 314 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 SAAL1Q96ER3 474 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 CALR3Q96L12 384 aaKnown RBP15.89■□□□□ 0.13
CBWD3-205ENST00000469687 ISCUQ9H1K1 167 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 RGS17Q9UGC6 210 aaPredicted RBP15.89■□□□□ 0.13
CBWD3-205ENST00000469687 RLFQ13129 1914 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 CCDC169A6NNP5 214 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 CTNND1O60716 968 aaKnown RBP15.89■□□□□ 0.13
CBWD3-205ENST00000469687 COPB2P35606 906 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 NCKAP1LP55160 1127 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 PSMC5P62195 406 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 PPFIA1Q13136 1202 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 ALCAMQ13740 583 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 CFAP58Q5T655 872 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 NBPF12Q5TAG4 269 aaPredicted RBP15.89■□□□□ 0.13
CBWD3-205ENST00000469687 ARHGEF16Q5VV41 709 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 POTEAQ6S8J7 498 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 ANO5Q75V66 913 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 ADAT2Q7Z6V5 191 aaKnown RBP15.89■□□□□ 0.13
CBWD3-205ENST00000469687 C12orf56Q8IXR9 622 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 POP1Q99575 1024 aaKnown RBP15.89■□□□□ 0.13
CBWD3-205ENST00000469687 VPS33BQ9H267 617 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 RABEP2Q9H5N1 569 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 ANKRD62A6NC57 917 aa15.88■□□□□ 0.13
CBWD3-205ENST00000469687 VWA5AO00534 786 aa15.88■□□□□ 0.13
CBWD3-205ENST00000469687 TTI1O43156 1089 aa15.88■□□□□ 0.13
CBWD3-205ENST00000469687 SHOX2O60902 331 aaPredicted RBP15.88■□□□□ 0.13
CBWD3-205ENST00000469687 CCDC172P0C7W6 258 aa15.88■□□□□ 0.13
CBWD3-205ENST00000469687 FLT3P36888 993 aa15.88■□□□□ 0.13
CBWD3-205ENST00000469687 MAP2K1Q02750 393 aaPredicted RBP15.88■□□□□ 0.13
CBWD3-205ENST00000469687 ZNF211Q13398 564 aaPredicted RBP15.88■□□□□ 0.13
CBWD3-205ENST00000469687 PRAMEF18Q5VWM3 479 aa15.88■□□□□ 0.13
CBWD3-205ENST00000469687 AADACL2Q6P093 401 aa15.88■□□□□ 0.13
CBWD3-205ENST00000469687 RPUSD2Q8IZ73 545 aaKnown RBP15.88■□□□□ 0.13
CBWD3-205ENST00000469687 MREGQ8N565 214 aa15.88■□□□□ 0.13
CBWD3-205ENST00000469687 WHAMMQ8TF30 809 aa15.88■□□□□ 0.13
CBWD3-205ENST00000469687 BSNDQ8WZ55 320 aa15.88■□□□□ 0.13
CBWD3-205ENST00000469687 SEMA4DQ92854 862 aa15.88■□□□□ 0.13
CBWD3-205ENST00000469687 PCDHB18PQ96TA0 734 aa15.88■□□□□ 0.13
CBWD3-205ENST00000469687 WDR64B1ANS9 1081 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 BHMG1C9JSJ3 638 aaPredicted RBP15.87■□□□□ 0.13
CBWD3-205ENST00000469687 SORBS3O60504 671 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 SGPL1O95470 568 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 FTLP02792 175 aaPredicted RBP15.87■□□□□ 0.13
CBWD3-205ENST00000469687 NPTX2P47972 431 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 MXI1P50539 228 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 PRPF4BQ13523 1007 aaKnown RBP15.87■□□□□ 0.13
CBWD3-205ENST00000469687 TMEM161BQ8NDZ6 487 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 JDP2Q8WYK2 163 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 ALG3Q92685 438 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 ZKSCAN4Q969J2 545 aaPredicted RBP15.87■□□□□ 0.13
CBWD3-205ENST00000469687 CCDC127Q96BQ5 260 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 FAM84AQ96KN4 292 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 KREMEN1Q96MU8 473 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 TAOK3Q9H2K8 898 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 ERVK-5Q9HDB9 667 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 TOPORSQ9NS56 1045 aaPredicted RBP15.87■□□□□ 0.13
CBWD3-205ENST00000469687 RNF146Q9NTX7 359 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 TMOD4Q9NZQ9 345 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 CWC15Q9P013 229 aaKnown RBP15.87■□□□□ 0.13
CBWD3-205ENST00000469687 TCEAL9Q9UHQ7 104 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 CTDP1Q9Y5B0 961 aaPredicted RBP15.87■□□□□ 0.13
CBWD3-205ENST00000469687 ARID2Q68CP9 1835 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 DOCK1Q14185 1865 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 DAPK3O43293 454 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 ATMINO43313 823 aaPredicted RBP15.87■□□□□ 0.13
CBWD3-205ENST00000469687 IVLP07476 585 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 RFX1P22670 979 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 IRAK1P51617 712 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 TNFAIP1Q13829 316 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 SNRNP35Q16560 246 aaKnown RBP15.87■□□□□ 0.13
CBWD3-205ENST00000469687 NOP9Q86U38 636 aaKnown RBP15.87■□□□□ 0.13
CBWD3-205ENST00000469687 TMEM174Q8WUU8 243 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 ST6GALNAC4Q9H4F1 302 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 PIM2Q9P1W9 311 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 HACL1Q9UJ83 578 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 TBX20Q9UMR3 447 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 GRIN2DO15399 1336 aa15.87■□□□□ 0.13
CBWD3-205ENST00000469687 CCDC188H7C350 402 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 NFKBIEO00221 500 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 ZNF862O60290 1169 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 ZBED4O75132 1171 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 CHRNB2P17787 502 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 MARCKSL1P49006 195 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 ZNF280AP59817 542 aaPredicted RBP15.86■□□□□ 0.13
CBWD3-205ENST00000469687 SP4Q02446 784 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 UAP1Q16222 522 aaPredicted RBP15.86■□□□□ 0.13
CBWD3-205ENST00000469687 SLC39A4Q6P5W5 647 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 SLC47A2Q86VL8 602 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 MICALL2Q8IY33 904 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 PPM1KQ8N3J5 372 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 RNPC3Q96LT9 517 aaKnown RBP15.86■□□□□ 0.13
CBWD3-205ENST00000469687 RSPH14Q9UHP6 348 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 PLAAQ9Y263 795 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 PFASO15067 1338 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 TMEM110-MUSTN1A8MSY1 372 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 P4HA2O15460 535 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 CYP26A1O43174 497 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 RGS20O76081 388 aa15.86■□□□□ 0.13
CBWD3-205ENST00000469687 HSPA9P38646 679 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms