RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 NFASCO94856 1347 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 TMEM8BA6NDV4 472 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 DDX39AO00148 427 aaKnown RBP14.33□□□□□ -0.12
HDAC6-217ENST00000469223 CCNE2O96020 404 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 SOD2P04179 222 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 PHKA2P46019 1235 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 FOXC1Q12948 553 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 PDXDC2PQ6P474 469 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 MTSS1LQ765P7 747 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 ZNF280BQ86YH2 543 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 SCLT1Q96NL6 688 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 MAP7D2Q96T17 732 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 ADAM33Q9BZ11 813 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 PRKD2Q9BZL6 878 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 ADAMTS10Q9H324 1103 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 STK39Q9UEW8 545 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 CDH7Q9ULB5 785 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 SALL3Q9BXA9 1300 aa14.33□□□□□ -0.12
HDAC6-217ENST00000469223 CFAP46Q8IYW2 2715 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 IGKV6D-21A0A0A0MT36 114 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 PAPLNO95428 1278 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 RBM25P49756 843 aaKnown RBP14.32□□□□□ -0.12
HDAC6-217ENST00000469223 NTHL1P78549 312 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 ADCY1Q08828 1119 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 FZD5Q13467 585 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 PPP2R5DQ14738 602 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 CCDC6Q16204 474 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 ZNF852Q6ZMS4 543 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 TRMT1LQ7Z2T5 733 aaKnown RBP14.32□□□□□ -0.12
HDAC6-217ENST00000469223 LRRC71Q8N4P6 559 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 C12orf50Q8NA57 414 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-217ENST00000469223 RSPH1Q8WYR4 309 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 PHF20Q9BVI0 1012 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 CHRDQ9H2X0 955 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 ZNF302Q9NR11 478 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 HEBP1Q9NRV9 189 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 ZDHHC7Q9NXF8 308 aa14.32□□□□□ -0.12
HDAC6-217ENST00000469223 NDRG2Q9UN36 371 aaKnown RBP14.32□□□□□ -0.12
HDAC6-217ENST00000469223 MAFGO15525 162 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 CSDE1O75534 798 aaKnown RBP14.31□□□□□ -0.12
HDAC6-217ENST00000469223 ATG7O95352 703 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 DARSP14868 501 aaKnown RBP14.31□□□□□ -0.12
HDAC6-217ENST00000469223 ATP4AP20648 1035 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 GLUD2P49448 558 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 STPG1Q5TH74 334 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 TWF2Q6IBS0 349 aaKnown RBP14.31□□□□□ -0.12
HDAC6-217ENST00000469223 B4GALNT3Q6L9W6 998 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 TAS1R1Q7RTX1 841 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 PALB2Q86YC2 1186 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 GLYCTKQ8IVS8 523 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 CKAP2LQ8IYA6 745 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 FAM160A2Q8N612 972 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-217ENST00000469223 NELL2Q99435 816 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 KRT23Q9C075 422 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 MRPS17Q9Y2R5 130 aaKnown RBP14.31□□□□□ -0.12
HDAC6-217ENST00000469223 PRG3Q9Y2Y8 225 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-217ENST00000469223 EML5Q05BV3 1969 aa14.31□□□□□ -0.12
HDAC6-217ENST00000469223 MYO18BQ8IUG5 2567 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 SPDYE3A6NKU9 549 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 SHISA7A6NL88 538 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 CHURC1-FNTBB4DL54 471 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 HRO43593 1189 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 DDHD2O94830 711 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 KIF5BP33176 963 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 FNTBP49356 437 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 GPC3P51654 580 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 CCR3P51677 355 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 SATB1Q01826 763 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 ZNF252P-AS1Q0IIN9 211 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 ABHD15Q6UXT9 468 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 CYB5R4Q7L1T6 521 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 GRASPQ7Z6J2 395 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-217ENST00000469223 LINC01465Q8N7H1 131 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 HDAC7Q8WUI4 952 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 GATA6Q92908 595 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 FGF13Q92913 245 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 PLEKHA4Q9H4M7 779 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 SENP2Q9HC62 589 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 MARCH5Q9NX47 278 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 CELSR3Q9NYQ7 3312 aa14.3□□□□□ -0.12
HDAC6-217ENST00000469223 HECTD1Q9ULT8 2610 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 CACNA1EQ15878 2313 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 TGM5O43548 720 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 OFD1O75665 1012 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 TOP3BO95985 862 aaKnown RBP14.29□□□□□ -0.12
HDAC6-217ENST00000469223 NOVA1P51513 510 aaKnown RBP14.29□□□□□ -0.12
HDAC6-217ENST00000469223 MFAP1P55081 439 aaKnown RBP14.29□□□□□ -0.12
HDAC6-217ENST00000469223 CENPQQ7L2Z9 268 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-217ENST00000469223 URGCPQ8TCY9 931 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 NLRP7Q8WX94 980 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 MXRA8Q9BRK3 442 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 LSM14BQ9BX40 385 aaKnown RBP14.29□□□□□ -0.12
HDAC6-217ENST00000469223 CNNM2Q9H8M5 875 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 RXFP1Q9HBX9 757 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 AGO4Q9HCK5 861 aaKnown RBP14.29□□□□□ -0.12
HDAC6-217ENST00000469223 WASF3Q9UPY6 502 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 SSX2IPQ9Y2D8 614 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 FAN1Q9Y2M0 1017 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 ACACAQ13085 2346 aa14.29□□□□□ -0.12
HDAC6-217ENST00000469223 NRP1O14786 923 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms