RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 FLCNQ8NFG4 579 aa14.66□□□□□ -0.06
PTPN7-207ENST00000468385 URGCPQ8TCY9 931 aa14.66□□□□□ -0.06
PTPN7-207ENST00000468385 JPH2Q9BR39 696 aaPredicted RBP14.66□□□□□ -0.06
PTPN7-207ENST00000468385 TMEM175Q9BSA9 504 aa14.66□□□□□ -0.06
PTPN7-207ENST00000468385 EMILIN2Q9BXX0 1053 aa14.66□□□□□ -0.06
PTPN7-207ENST00000468385 RSAD1Q9HA92 442 aa14.66□□□□□ -0.06
PTPN7-207ENST00000468385 KCNK12Q9HB15 430 aa14.66□□□□□ -0.06
PTPN7-207ENST00000468385 STK39Q9UEW8 545 aa14.66□□□□□ -0.06
PTPN7-207ENST00000468385 DUSP12Q9UNI6 340 aa14.66□□□□□ -0.06
PTPN7-207ENST00000468385 COL4A3BPQ9Y5P4 624 aa14.66□□□□□ -0.06
PTPN7-207ENST00000468385 SPDYE4A6NLX3 237 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 NRP1O14786 923 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 SLC37A4O43826 429 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 ALDH2P05091 517 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 HOXA11P31270 313 aaPredicted RBP14.65□□□□□ -0.06
PTPN7-207ENST00000468385 NPEPPSP55786 919 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 LETM2Q2VYF4 491 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 C15orf39Q6ZRI6 1047 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 BLIDQ8IZY5 108 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 ZNF579Q8NAF0 562 aaKnown RBP14.65□□□□□ -0.06
PTPN7-207ENST00000468385 DAGLBQ8NCG7 672 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 NKD2Q969F2 451 aaPredicted RBP14.65□□□□□ -0.06
PTPN7-207ENST00000468385 MINDY3Q9H8M7 445 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 MARCH5Q9NX47 278 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 FAN1Q9Y2M0 1017 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 C2orf16Q68DN1 1984 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 CNTNAP2Q9UHC6 1331 aa14.65□□□□□ -0.06
PTPN7-207ENST00000468385 N4BP1O75113 896 aaKnown RBP14.64□□□□□ -0.07
PTPN7-207ENST00000468385 POMCP01189 267 aa14.64□□□□□ -0.07
PTPN7-207ENST00000468385 SOD2P04179 222 aa14.64□□□□□ -0.07
PTPN7-207ENST00000468385 QARSP47897 775 aaKnown RBP14.64□□□□□ -0.07
PTPN7-207ENST00000468385 SSRP1Q08945 709 aaKnown RBP14.64□□□□□ -0.07
PTPN7-207ENST00000468385 PPP2R5CQ13362 524 aa14.64□□□□□ -0.07
PTPN7-207ENST00000468385 TOB2Q14106 344 aaPredicted RBP14.64□□□□□ -0.07
PTPN7-207ENST00000468385 CENPQQ7L2Z9 268 aaPredicted RBP14.64□□□□□ -0.07
PTPN7-207ENST00000468385 SRGAP1Q7Z6B7 1085 aa14.64□□□□□ -0.07
PTPN7-207ENST00000468385 CCDC105Q8IYK2 499 aa14.64□□□□□ -0.07
PTPN7-207ENST00000468385 TRIM22Q8IYM9 498 aa14.64□□□□□ -0.07
PTPN7-207ENST00000468385 CMASQ8NFW8 434 aaPredicted RBP14.64□□□□□ -0.07
PTPN7-207ENST00000468385 PRPF31Q8WWY3 499 aaKnown RBP14.64□□□□□ -0.07
PTPN7-207ENST00000468385 TMEM143Q96AN5 459 aa14.64□□□□□ -0.07
PTPN7-207ENST00000468385 FAM193BQ96PV7 902 aaPredicted RBP14.64□□□□□ -0.07
PTPN7-207ENST00000468385 HERC2P3Q9BVR0 1158 aa14.64□□□□□ -0.07
PTPN7-207ENST00000468385 DHX33Q9H6R0 707 aaKnown RBP14.64□□□□□ -0.07
PTPN7-207ENST00000468385 MAN1C1Q9NR34 630 aa14.64□□□□□ -0.07
PTPN7-207ENST00000468385 MRPL17Q9NRX2 175 aaKnown RBP14.64□□□□□ -0.07
PTPN7-207ENST00000468385 KANSL3Q9P2N6 904 aa14.64□□□□□ -0.07
PTPN7-207ENST00000468385 WRAP73Q9P2S5 460 aaPredicted RBP14.64□□□□□ -0.07
PTPN7-207ENST00000468385 DDX25Q9UHL0 483 aaKnown RBP14.64□□□□□ -0.07
PTPN7-207ENST00000468385 VAV3Q9UKW4 847 aa14.64□□□□□ -0.07
PTPN7-207ENST00000468385 DCHS1Q96JQ0 3298 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 C2CD2LO14523 706 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 NARSO43776 548 aaKnown RBP14.63□□□□□ -0.07
PTPN7-207ENST00000468385 DEXIO95424 95 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 EFEMP2O95967 443 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 SRGAP2CP0DJJ0 459 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 NCLP19338 710 aaKnown RBP14.63□□□□□ -0.07
PTPN7-207ENST00000468385 PSMA5P28066 241 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 FOXK2Q01167 660 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 NONOQ15233 471 aaKnown RBP eCLIP14.63□□□□□ -0.07
PTPN7-207ENST00000468385 INF2Q27J81 1249 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 TAS1R1Q7RTX1 841 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 COLGALT2Q8IYK4 626 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 RNF168Q8IYW5 571 aaPredicted RBP14.63□□□□□ -0.07
PTPN7-207ENST00000468385 SIX5Q8N196 739 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 SMG8Q8ND04 991 aaKnown RBP14.63□□□□□ -0.07
PTPN7-207ENST00000468385 PSPC1Q8WXF1 523 aaKnown RBP14.63□□□□□ -0.07
PTPN7-207ENST00000468385 SLC7A3Q8WY07 619 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 CEP170P1Q96L14 293 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 AIFM3Q96NN9 605 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 RPS6KC1Q96S38 1066 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 RTP3Q9BQQ7 232 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 KCNMB3Q9NPA1 279 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 IGSF9Q9P2J2 1179 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 PPME1Q9Y570 386 aa14.63□□□□□ -0.07
PTPN7-207ENST00000468385 TEX28O15482 410 aa14.62□□□□□ -0.07
PTPN7-207ENST00000468385 URODP06132 367 aa14.62□□□□□ -0.07
PTPN7-207ENST00000468385 P4HBP07237 508 aaKnown RBP14.62□□□□□ -0.07
PTPN7-207ENST00000468385 PTPRZ1P23471 2315 aaPredicted RBP14.62□□□□□ -0.07
PTPN7-207ENST00000468385 AK2P54819 239 aa14.62□□□□□ -0.07
PTPN7-207ENST00000468385 LAMTOR4Q0VGL1 99 aa14.62□□□□□ -0.07
PTPN7-207ENST00000468385 ANGPT1Q15389 498 aa14.62□□□□□ -0.07
PTPN7-207ENST00000468385 GALNT17Q6IS24 598 aa14.62□□□□□ -0.07
PTPN7-207ENST00000468385 DTWD2Q8NBA8 298 aa14.62□□□□□ -0.07
PTPN7-207ENST00000468385 RHOBTB2Q9BYZ6 727 aa14.62□□□□□ -0.07
PTPN7-207ENST00000468385 WDR6Q9NNW5 1121 aaKnown RBP14.62□□□□□ -0.07
PTPN7-207ENST00000468385 BMP2KQ9NSY1 1161 aaPredicted RBP14.62□□□□□ -0.07
PTPN7-207ENST00000468385 FBXL21Q9UKT6 434 aa14.62□□□□□ -0.07
PTPN7-207ENST00000468385 PRG3Q9Y2Y8 225 aaPredicted RBP14.62□□□□□ -0.07
PTPN7-207ENST00000468385 CCDC195A0A1B0GUA6 201 aa14.61□□□□□ -0.07
PTPN7-207ENST00000468385 INPPL1O15357 1258 aa14.61□□□□□ -0.07
PTPN7-207ENST00000468385 DKC1O60832 514 aaKnown RBP eCLIP14.61□□□□□ -0.07
PTPN7-207ENST00000468385 ITGA4P13612 1032 aa14.61□□□□□ -0.07
PTPN7-207ENST00000468385 RFC5P40937 340 aa14.61□□□□□ -0.07
PTPN7-207ENST00000468385 OR1G1P47890 313 aa14.61□□□□□ -0.07
PTPN7-207ENST00000468385 DSC1Q08554 894 aa14.61□□□□□ -0.07
PTPN7-207ENST00000468385 KIAA0319Q5VV43 1072 aa14.61□□□□□ -0.07
PTPN7-207ENST00000468385 RUFY3Q7L099 469 aa14.61□□□□□ -0.07
PTPN7-207ENST00000468385 KRT25Q7Z3Z0 450 aa14.61□□□□□ -0.07
PTPN7-207ENST00000468385 FERMT3Q86UX7 667 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms