RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 SEPT8Q92599 483 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 SYAP1Q96A49 352 aaPredicted RBP18.79■□□□□ 0.6
VARS2-204ENST00000467717 LBHD1Q9BQE6 289 aaPredicted RBP18.79■□□□□ 0.6
VARS2-204ENST00000467717 IFIH1Q9BYX4 1025 aaKnown RBP18.79■□□□□ 0.6
VARS2-204ENST00000467717 COL6A3P12111 3177 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 PPP1R37O75864 691 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 ERLIN2O94905 339 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 PRKCBP05771 671 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 FGFR4P22455 802 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 NCBP1Q09161 790 aaKnown RBP18.78■□□□□ 0.6
VARS2-204ENST00000467717 STK4Q13043 487 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 AMHR2Q16671 573 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 ZC2HC1CQ53FD0 456 aaPredicted RBP18.78■□□□□ 0.6
VARS2-204ENST00000467717 APBB2Q92870 758 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 HVCN1Q96D96 273 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 STRA6Q9BX79 667 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 FGFBP2Q9BYJ0 223 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 GTPBP4Q9BZE4 634 aaKnown RBP18.78■□□□□ 0.6
VARS2-204ENST00000467717 ERVK-5Q9HDB9 667 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 SLC39A2Q9NP94 309 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 TBX20Q9UMR3 447 aa18.78■□□□□ 0.6
VARS2-204ENST00000467717 TSPAN1O60635 241 aa18.77■□□□□ 0.6
VARS2-204ENST00000467717 MYBP10242 640 aa18.77■□□□□ 0.6
VARS2-204ENST00000467717 CASP5P51878 434 aa18.77■□□□□ 0.6
VARS2-204ENST00000467717 PRPF4BQ13523 1007 aaKnown RBP18.77■□□□□ 0.6
VARS2-204ENST00000467717 CAVIN1Q6NZI2 390 aaKnown RBP18.77■□□□□ 0.6
VARS2-204ENST00000467717 TAS1R3Q7RTX0 852 aa18.77■□□□□ 0.6
VARS2-204ENST00000467717 MAP4K3Q8IVH8 894 aa18.77■□□□□ 0.6
VARS2-204ENST00000467717 KIAA0895Q8NCT3 520 aa18.77■□□□□ 0.6
VARS2-204ENST00000467717 DBF4BQ8NFT6 615 aa18.77■□□□□ 0.6
VARS2-204ENST00000467717 FTHL17Q9BXU8 183 aa18.77■□□□□ 0.6
VARS2-204ENST00000467717 IL23AQ9NPF7 189 aa18.77■□□□□ 0.6
VARS2-204ENST00000467717 CHST12Q9NRB3 414 aa18.77■□□□□ 0.6
VARS2-204ENST00000467717 TMEM63CQ9P1W3 806 aa18.77■□□□□ 0.6
VARS2-204ENST00000467717 MAN1B1Q9UKM7 699 aa18.77■□□□□ 0.6
VARS2-204ENST00000467717 EVPLQ92817 2033 aa18.76■□□□□ 0.59
VARS2-204ENST00000467717 EIF3DO15371 548 aaKnown RBP eCLIP18.76■□□□□ 0.595e-7■□□□□ 10.2
VARS2-204ENST00000467717 HOXA11P31270 313 aaPredicted RBP18.76■□□□□ 0.59
VARS2-204ENST00000467717 L1TD1Q5T7N2 865 aaKnown RBP18.76■□□□□ 0.59
VARS2-204ENST00000467717 ZNF658Q5TYW1 1059 aaPredicted RBP18.76■□□□□ 0.59
VARS2-204ENST00000467717 RBM43Q6ZSC3 357 aaKnown RBP18.76■□□□□ 0.59
VARS2-204ENST00000467717 EPM2AIP1Q7L775 607 aaPredicted RBP18.76■□□□□ 0.59
VARS2-204ENST00000467717 TRIML1Q8N9V2 468 aa18.76■□□□□ 0.59
VARS2-204ENST00000467717 GLIS3Q8NEA6 775 aa18.76■□□□□ 0.59
VARS2-204ENST00000467717 SCFD1Q8WVM8 642 aa18.76■□□□□ 0.59
VARS2-204ENST00000467717 VWCEQ96DN2 955 aa18.76■□□□□ 0.59
VARS2-204ENST00000467717 MRPL4Q9BYD3 311 aaKnown RBP18.76■□□□□ 0.59
VARS2-204ENST00000467717 AGPAT5Q9NUQ2 364 aa18.76■□□□□ 0.59
VARS2-204ENST00000467717 EXOC7Q9UPT5 735 aa18.76■□□□□ 0.59
VARS2-204ENST00000467717 PIN4Q9Y237 131 aaKnown RBP18.76■□□□□ 0.59
VARS2-204ENST00000467717 UBE4BO95155 1302 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 CNTNAP2Q9UHC6 1331 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 B4GALT5O43286 388 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 PRPF6O94906 941 aaKnown RBP18.75■□□□□ 0.59
VARS2-204ENST00000467717 KIF20AO95235 890 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 ZSCAN20P17040 1043 aaPredicted RBP18.75■□□□□ 0.59
VARS2-204ENST00000467717 ARF4P18085 180 aaPredicted RBP18.75■□□□□ 0.59
VARS2-204ENST00000467717 AXLP30530 894 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 BMT2Q1RMZ1 405 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 CNKSR3Q6P9H4 555 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 ZPBP2Q6X784 338 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 ZNF507Q8TCN5 953 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 ACCSQ96QU6 501 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 TMX1Q9H3N1 280 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 TMEM206Q9H813 350 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 A0A0C4DFX4 3053 aa18.75■□□□□ 0.59
VARS2-204ENST00000467717 A0A1B0GUA9 196 aa18.74■□□□□ 0.59
VARS2-204ENST00000467717 BIN1O00499 593 aa18.74■□□□□ 0.59
VARS2-204ENST00000467717 EDN1P05305 212 aa18.74■□□□□ 0.59
VARS2-204ENST00000467717 KCNA1Q09470 495 aa18.74■□□□□ 0.59
VARS2-204ENST00000467717 MORC3Q14149 939 aa18.74■□□□□ 0.59
VARS2-204ENST00000467717 TMEM132AQ24JP5 1023 aa18.74■□□□□ 0.59
VARS2-204ENST00000467717 NOTUMQ6P988 496 aa18.74■□□□□ 0.59
VARS2-204ENST00000467717 PSRC1Q6PGN9 363 aaPredicted RBP18.74■□□□□ 0.59
VARS2-204ENST00000467717 MYOCDQ8IZQ8 938 aa18.74■□□□□ 0.59
VARS2-204ENST00000467717 CCDC51Q96ER9 411 aa18.74■□□□□ 0.59
VARS2-204ENST00000467717 TARS2Q9BW92 718 aaKnown RBP18.74■□□□□ 0.59
VARS2-204ENST00000467717 USP20Q9Y2K6 914 aa18.74■□□□□ 0.59
VARS2-204ENST00000467717 GDAQ9Y2T3 454 aa18.74■□□□□ 0.59
VARS2-204ENST00000467717 ALPK3Q96L96 1907 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 TTLL13PA6NNM8 815 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 HNRNPDLO14979 420 aaKnown RBP18.73■□□□□ 0.59
VARS2-204ENST00000467717 PIGRP01833 764 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 ACRP10323 421 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 ACTN1P12814 892 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 MAGEA10P43363 369 aaPredicted RBP18.73■□□□□ 0.59
VARS2-204ENST00000467717 IKBKEQ14164 716 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 ATF7IP2Q5U623 682 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 ISM2Q6H9L7 571 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 C16orf59Q7L2K0 433 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 SYCP3Q8IZU3 236 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 BICD1Q96G01 975 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 CPB2Q96IY4 423 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 ACO2Q99798 780 aaKnown RBP18.73■□□□□ 0.59
VARS2-204ENST00000467717 TNFSF13BQ9Y275 285 aa18.73■□□□□ 0.59
VARS2-204ENST00000467717 RBAK-RBAKDNI3L0D1 243 aa18.72■□□□□ 0.59
VARS2-204ENST00000467717 EFCAB14O75071 495 aa18.72■□□□□ 0.59
VARS2-204ENST00000467717 TOM1L1O75674 476 aa18.72■□□□□ 0.59
VARS2-204ENST00000467717 FGBP02675 491 aa18.72■□□□□ 0.59
VARS2-204ENST00000467717 BMP6P22004 513 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms