RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 NAT10Q9H0A0 1025 aaKnown RBP13.34□□□□□ -0.27
CTNS-205ENST00000467663 UBE2ZQ9H832 354 aaPredicted RBP13.34□□□□□ -0.27
CTNS-205ENST00000467663 BMP2KQ9NSY1 1161 aaPredicted RBP13.34□□□□□ -0.27
CTNS-205ENST00000467663 TMEM161AQ9NX61 479 aa13.34□□□□□ -0.27
CTNS-205ENST00000467663 DACH1Q9UI36 760 aa13.34□□□□□ -0.27
CTNS-205ENST00000467663 VCANP13611 3396 aa13.34□□□□□ -0.27
CTNS-205ENST00000467663 RALGAPA2Q2PPJ7 1873 aa13.33□□□□□ -0.27
CTNS-205ENST00000467663 A0A087X0B3 334 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 LYPLA2O95372 231 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 CDC25AP30304 524 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 PPP1R2P41236 205 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 DNM2P50570 870 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 COL19A1Q14993 1142 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 PAN2Q504Q3 1202 aaKnown RBP13.33□□□□□ -0.28
CTNS-205ENST00000467663 C4orf19Q8IY42 314 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 RAD54LQ92698 747 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 ZNF668Q96K58 619 aaPredicted RBP13.33□□□□□ -0.28
CTNS-205ENST00000467663 NACC1Q96RE7 527 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 EIF2AK1Q9BQI3 630 aaKnown RBP13.33□□□□□ -0.28
CTNS-205ENST00000467663 JPH2Q9BR39 696 aaPredicted RBP13.33□□□□□ -0.28
CTNS-205ENST00000467663 PANK2Q9BZ23 570 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 NSUN3Q9H649 340 aaKnown RBP13.33□□□□□ -0.28
CTNS-205ENST00000467663 CYP26B1Q9NR63 512 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 KCND2Q9NZV8 630 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 WRAP73Q9P2S5 460 aaPredicted RBP13.33□□□□□ -0.28
CTNS-205ENST00000467663 PLAGL2Q9UPG8 496 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 DNM3Q9UQ16 869 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 PPME1Q9Y570 386 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 REV3LO60673 3130 aa13.33□□□□□ -0.28
CTNS-205ENST00000467663 SPTBN5Q9NRC6 3674 aaKnown RBP13.32□□□□□ -0.28
CTNS-205ENST00000467663 NLRC5Q86WI3 1866 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 PVALEFA0A1B0GWK0 134 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 GOLGA6L3A6NEY3 463 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 PP2D1A8MPX8 630 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 ZSCAN20P17040 1043 aaPredicted RBP13.32□□□□□ -0.28
CTNS-205ENST00000467663 NPEPPSP55786 919 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 TYRO3Q06418 890 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 DPYDQ12882 1025 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 KCNB1Q14721 858 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 LEXMQ3ZCV2 418 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 TCEAL5Q5H9L2 206 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 L1TD1Q5T7N2 865 aaKnown RBP13.32□□□□□ -0.28
CTNS-205ENST00000467663 FAM102BQ5T8I3 360 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 PLA2G4FQ68DD2 849 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 ZNF410Q86VK4 478 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 CATSPER3Q86XQ3 398 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 EXOC8Q8IYI6 725 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 NLRP7Q8WX94 980 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 PNMA5Q96PV4 448 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 C7orf25Q9BPX7 421 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 LXNQ9BS40 222 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 GCOM2Q9BZD3 368 aaPredicted RBP13.32□□□□□ -0.28
CTNS-205ENST00000467663 ZSWIM4Q9H7M6 989 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 ATP6V0A4Q9HBG4 840 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 RGL1Q9NZL6 768 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 SUCLA2Q9P2R7 463 aaPredicted RBP13.32□□□□□ -0.28
CTNS-205ENST00000467663 PCDHA5Q9Y5H7 936 aa13.32□□□□□ -0.28
CTNS-205ENST00000467663 A0A087WZ62 844 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 TBKBP1A7MCY6 615 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 SLITRK3O94933 977 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 EYA4O95677 639 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 ITGB1P05556 798 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 SPATA31C1P0DKV0 1188 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 YWHABP31946 246 aaKnown RBP13.31□□□□□ -0.28
CTNS-205ENST00000467663 NLRP12P59046 1061 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 CAMK1Q14012 370 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 UVSSAQ2YD98 709 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 OTUD6AQ7L8S5 288 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 MLKLQ8NB16 471 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 KLHL23Q8NBE8 558 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 SPPL3Q8TCT6 385 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 SLC7A3Q8WY07 619 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 PABPC5Q96DU9 382 aaKnown RBP13.31□□□□□ -0.28
CTNS-205ENST00000467663 DYDC2Q96IM9 177 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 CEP170P1Q96L14 293 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 SCLT1Q96NL6 688 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 FDXACB1Q9BRP7 624 aaPredicted RBP13.31□□□□□ -0.28
CTNS-205ENST00000467663 INO80BQ9C086 356 aaPredicted RBP13.31□□□□□ -0.28
CTNS-205ENST00000467663 DHX33Q9H6R0 707 aaKnown RBP13.31□□□□□ -0.28
CTNS-205ENST00000467663 ALG13Q9NP73 1137 aaKnown RBP13.31□□□□□ -0.28
CTNS-205ENST00000467663 CHST12Q9NRB3 414 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 KIAA1024Q9UPX6 916 aa13.31□□□□□ -0.28
CTNS-205ENST00000467663 A0A0U1RQF3 1178 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 FSD2A1L4K1 749 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 HOXA2O43364 376 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 NCK2O43639 380 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 MED24O75448 989 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 CSDE1O75534 798 aaKnown RBP13.3□□□□□ -0.28
CTNS-205ENST00000467663 FGFR1P11362 822 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 IBSPP21815 317 aaPredicted RBP13.3□□□□□ -0.28
CTNS-205ENST00000467663 FGFR4P22455 802 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 KCNA5P22460 613 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 DNAJB1P25685 340 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 RFC5P40937 340 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 MRE11P49959 708 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 PSMD2Q13200 908 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 PNOCQ13519 176 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 CTTNQ14247 550 aaKnown RBP13.3□□□□□ -0.28
CTNS-205ENST00000467663 ECHDC2Q86YB7 292 aa13.3□□□□□ -0.28
CTNS-205ENST00000467663 RHPN2Q8IUC4 686 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms