RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 NCBP1Q09161 790 aaKnown RBP11.26□□□□□ -0.61
CD40-204ENST00000466205 CAMK1Q14012 370 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 ARL6IP4Q66PJ3 421 aaKnown RBP11.26□□□□□ -0.61
CD40-204ENST00000466205 RINT1Q6NUQ1 792 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 NOTUMQ6P988 496 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 AGMOQ6ZNB7 445 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 ADGRD2Q7Z7M1 963 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 RBM23Q86U06 439 aaKnown RBP11.26□□□□□ -0.61
CD40-204ENST00000466205 SMG8Q8ND04 991 aaKnown RBP11.26□□□□□ -0.61
CD40-204ENST00000466205 SPPL3Q8TCT6 385 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 MICAL1Q8TDZ2 1067 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 LRRC15Q8TF66 581 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 PGBD4Q96DM1 585 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 IFT74Q96LB3 600 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 CLIC6Q96NY7 704 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 USP28Q96RU2 1077 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 PLVAPQ9BX97 442 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 TRIM6Q9C030 488 aaPredicted RBP11.26□□□□□ -0.61
CD40-204ENST00000466205 CSRNP2Q9H175 543 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 NXF3Q9H4D5 531 aaKnown RBP11.26□□□□□ -0.61
CD40-204ENST00000466205 NSUN3Q9H649 340 aaKnown RBP11.26□□□□□ -0.61
CD40-204ENST00000466205 RSAD1Q9HA92 442 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 AAASQ9NRG9 546 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 LMCD1Q9NZU5 365 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 IPPQ9Y573 584 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 PRKCBP05771 671 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 PLA2G4BP0C869 781 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 SKIP12755 728 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 ITGA4P13612 1032 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 MLH1P40692 756 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 NAMPTP43490 491 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 RAB27AP51159 221 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 RNASELQ05823 741 aaKnown RBP11.25□□□□□ -0.61
CD40-204ENST00000466205 PKP1Q13835 747 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 PTPAQ15257 358 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 TMEM119Q4V9L6 283 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 TIGD5Q53EQ6 642 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 NOMO2Q5JPE7 1267 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 PLPP4Q5VZY2 271 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 CDCA2Q69YH5 1023 aaPredicted RBP11.25□□□□□ -0.61
CD40-204ENST00000466205 KCNT2Q6UVM3 1135 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 GLB1LQ6UWU2 654 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 USP49Q70CQ1 688 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
CD40-204ENST00000466205 P2RX5Q93086 422 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 HLA-CQ95604 372 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 CALML4Q96GE6 196 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 EPSTI1Q96J88 318 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 ZNF558Q96NG5 402 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 COL25A1Q9BXS0 654 aaPredicted RBP11.25□□□□□ -0.61
CD40-204ENST00000466205 NT5C3AQ9H0P0 336 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 NRDE2Q9H7Z3 1164 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 TBC1D13Q9NVG8 400 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 KLK14Q9P0G3 267 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 DNAJB4Q9UDY4 337 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 DAXXQ9UER7 740 aaPredicted RBP11.25□□□□□ -0.61
CD40-204ENST00000466205 PARP2Q9UGN5 583 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 FBXO2Q9UK22 296 aaPredicted RBP11.25□□□□□ -0.61
CD40-204ENST00000466205 ATG2AQ2TAZ0 1938 aa11.25□□□□□ -0.61
CD40-204ENST00000466205 H3BQ06 376 aaPredicted RBP11.24□□□□□ -0.61
CD40-204ENST00000466205 PER2O15055 1255 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 LINC01565O15544 149 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 B4GALT3O60512 393 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 ZNF623O75123 536 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 DDHD2O94830 711 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 BMP15O95972 392 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 PLCG1P19174 1290 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 NCLP19338 710 aaKnown RBP11.24□□□□□ -0.61
CD40-204ENST00000466205 KCNA5P22460 613 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 AXLP30530 894 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 LONP1P36776 959 aaKnown RBP11.24□□□□□ -0.61
CD40-204ENST00000466205 NPTX2P47972 431 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 SLC12A3P55017 1021 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 BCAR1P56945 870 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 ERVFC1P60507 584 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 MRPS5P82675 430 aaKnown RBP11.24□□□□□ -0.61
CD40-204ENST00000466205 POU5F1BQ06416 359 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 HYAL1Q12794 435 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 PRPF4BQ13523 1007 aaKnown RBP11.24□□□□□ -0.61
CD40-204ENST00000466205 MCM6Q14566 821 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 PPP2R5AQ15172 486 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 CLUL1Q15846 466 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 MAPK6Q16659 721 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 HYIQ5T013 277 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 C1orf186Q6ZWK4 172 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 TMEM173Q86WV6 379 aaPredicted RBP11.24□□□□□ -0.61
CD40-204ENST00000466205 ZNF280BQ86YH2 543 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 DAW1Q8N136 415 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 SYT2Q8N9I0 419 aaPredicted RBP11.24□□□□□ -0.61
CD40-204ENST00000466205 URGCPQ8TCY9 931 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 KIFAP3Q92845 792 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 AK8Q96MA6 479 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 NECAB3Q96P71 396 aaPredicted RBP11.24□□□□□ -0.61
CD40-204ENST00000466205 ASB2Q96Q27 587 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 GAD1Q99259 594 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 TRAIPQ9BWF2 469 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 MRPL9Q9BYD2 267 aaKnown RBP11.24□□□□□ -0.61
CD40-204ENST00000466205 NFKBIZQ9BYH8 718 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 LMAN2LQ9H0V9 348 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 C2orf40Q9H1Z8 148 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms