RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 SAAL1Q96ER3 474 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 GPR20Q99678 358 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 INTS2Q9H0H0 1204 aaKnown RBP19.87■□□□□ 0.77
COL9A3-205ENST00000466192 ZNF446Q9NWS9 450 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 ADAMTS1Q9UHI8 967 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 SALL4Q9UJQ4 1053 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 CTAGE15A4D2H0 777 aa19.86■□□□□ 0.77
COL9A3-205ENST00000466192 CTAGE8P0CG41 777 aa19.86■□□□□ 0.77
COL9A3-205ENST00000466192 SLC18A3Q16572 532 aa19.86■□□□□ 0.77
COL9A3-205ENST00000466192 CTAGE6Q86UF2 777 aa19.86■□□□□ 0.77
COL9A3-205ENST00000466192 CBWD2Q8IUF1 395 aa19.86■□□□□ 0.77
COL9A3-205ENST00000466192 CTAGE4Q8IX94 777 aa19.86■□□□□ 0.77
COL9A3-205ENST00000466192 TRIM58Q8NG06 486 aa19.86■□□□□ 0.77
COL9A3-205ENST00000466192 LMO3Q8TAP4 145 aa19.86■□□□□ 0.77
COL9A3-205ENST00000466192 ASAP3Q8TDY4 903 aa19.86■□□□□ 0.77
COL9A3-205ENST00000466192 NRBP2Q9NSY0 501 aa19.86■□□□□ 0.77
COL9A3-205ENST00000466192 ARGLU1Q9NWB6 273 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-205ENST00000466192 A0A087X0T9 212 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 TACC1O75410 805 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 FAM228BP0C875 321 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 GLRA2P23416 452 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 ARL2P36404 184 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 PTK2Q05397 1052 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 SNRNP35Q16560 246 aaKnown RBP19.85■□□□□ 0.77
COL9A3-205ENST00000466192 SLC7A3Q8WY07 619 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 PARD6BQ9BYG5 372 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 PRDM10Q9NQV6 1147 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 PDGFCQ9NRA1 345 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 PJA2O43164 708 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 CELF2O95319 508 aaKnown RBP19.85■□□□□ 0.77
COL9A3-205ENST00000466192 PNMA6AP0CW24 399 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-205ENST00000466192 MCCD1P59942 119 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-205ENST00000466192 CCNA1P78396 465 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 COPS5Q92905 334 aa19.85■□□□□ 0.77
COL9A3-205ENST00000466192 ANO9A1A5B4 782 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 HNRNPDLO14979 420 aaKnown RBP19.84■□□□□ 0.77
COL9A3-205ENST00000466192 PRKCIP41743 596 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 GCLMP48507 274 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 BRDTQ58F21 947 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-205ENST00000466192 ZNF571Q7Z3V5 609 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-205ENST00000466192 ANKRD23Q86SG2 305 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 TRIM50Q86XT4 487 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 CAPZA3Q96KX2 299 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 AZI2Q9H6S1 392 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 APEX2Q9UBZ4 518 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 DNAJC12Q9UKB3 198 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 LOC102724159A0A0B4J2E5 919 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 LGR5O75473 907 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 RFC5P40937 340 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 PWP2Q15269 919 aaKnown RBP19.84■□□□□ 0.77
COL9A3-205ENST00000466192 ARMCX2Q7L311 632 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 DHX37Q8IY37 1157 aaKnown RBP19.84■□□□□ 0.77
COL9A3-205ENST00000466192 TXLNBQ8N3L3 684 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 C2orf69Q8N8R5 385 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 POMGNT1Q8WZA1 660 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 FBXL18Q96ME1 805 aa19.84■□□□□ 0.77
COL9A3-205ENST00000466192 ASB14A6NK59 587 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 H0YCG3 227 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 NOP56O00567 594 aaKnown RBP19.83■□□□□ 0.77
COL9A3-205ENST00000466192 BUB1O43683 1085 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 LRRN2O75325 713 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 TXNP10599 105 aaKnown RBP19.83■□□□□ 0.77
COL9A3-205ENST00000466192 MARK3P27448 753 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 ADORA2AP29274 412 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 CBX1P83916 185 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 ZNF792Q3KQV3 632 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 SPRYD7Q5W111 196 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 PHLDB3Q6NSJ2 640 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 GLG1Q92896 1179 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 SPATA33Q96N06 139 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 STK33Q9BYT3 514 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 GPR88Q9GZN0 384 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 LUC7LQ9NQ29 371 aaKnown RBP19.83■□□□□ 0.77
COL9A3-205ENST00000466192 USP20Q9Y2K6 914 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 JRKLQ9Y4A0 524 aa19.83■□□□□ 0.77
COL9A3-205ENST00000466192 BZW2Q9Y6E2 419 aaKnown RBP19.83■□□□□ 0.77
COL9A3-205ENST00000466192 F8VZ95 297 aa19.83■□□□□ 0.76
COL9A3-205ENST00000466192 ZNF185O15231 689 aa19.83■□□□□ 0.76
COL9A3-205ENST00000466192 N4BP1O75113 896 aaKnown RBP19.83■□□□□ 0.76
COL9A3-205ENST00000466192 NAMPTP43490 491 aa19.83■□□□□ 0.76
COL9A3-205ENST00000466192 NAP1L1P55209 391 aaKnown RBP19.83■□□□□ 0.76
COL9A3-205ENST00000466192 EPC2Q52LR7 807 aa19.83■□□□□ 0.76
COL9A3-205ENST00000466192 BICD1Q96G01 975 aa19.83■□□□□ 0.76
COL9A3-205ENST00000466192 ALS2CR12Q96Q35 445 aa19.83■□□□□ 0.76
COL9A3-205ENST00000466192 MORF4L1Q9UBU8 362 aa19.83■□□□□ 0.76
COL9A3-205ENST00000466192 KCNG1Q9UIX4 513 aa19.83■□□□□ 0.76
COL9A3-205ENST00000466192 LRRIQ4A6NIV6 560 aa19.82■□□□□ 0.76
COL9A3-205ENST00000466192 P4HA2O15460 535 aa19.82■□□□□ 0.76
COL9A3-205ENST00000466192 MAFO75444 373 aaPredicted RBP19.82■□□□□ 0.76
COL9A3-205ENST00000466192 GFPT2O94808 682 aa19.82■□□□□ 0.76
COL9A3-205ENST00000466192 STAT1P42224 750 aa19.82■□□□□ 0.76
COL9A3-205ENST00000466192 GCLCP48506 637 aaPredicted RBP19.82■□□□□ 0.76
COL9A3-205ENST00000466192 DRP2Q13474 957 aa19.82■□□□□ 0.76
COL9A3-205ENST00000466192 DRAP1Q14919 205 aaPredicted RBP19.82■□□□□ 0.76
COL9A3-205ENST00000466192 TMCO3Q6UWJ1 677 aa19.82■□□□□ 0.76
COL9A3-205ENST00000466192 PARD3BQ8TEW8 1205 aa19.82■□□□□ 0.76
COL9A3-205ENST00000466192 KCNN1Q92952 543 aa19.82■□□□□ 0.76
COL9A3-205ENST00000466192 PTPN18Q99952 460 aa19.82■□□□□ 0.76
COL9A3-205ENST00000466192 TMEM117Q9H0C3 514 aa19.82■□□□□ 0.76
COL9A3-205ENST00000466192 ANKZF1Q9H8Y5 726 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms