RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 NKX2-3Q8TAU0 364 aa10.14□□□□□ -0.79
CDHR3-203ENST00000466045 MDM1Q8TC05 714 aa10.14□□□□□ -0.79
CDHR3-203ENST00000466045 CCDC127Q96BQ5 260 aa10.14□□□□□ -0.79
CDHR3-203ENST00000466045 PGM2Q96G03 612 aa10.14□□□□□ -0.79
CDHR3-203ENST00000466045 DNAJC1Q96KC8 554 aaKnown RBP10.14□□□□□ -0.79
CDHR3-203ENST00000466045 COX4I2Q96KJ9 171 aa10.14□□□□□ -0.79
CDHR3-203ENST00000466045 CEP44Q9C0F1 390 aa10.14□□□□□ -0.79
CDHR3-203ENST00000466045 CCDC8Q9H0W5 538 aaPredicted RBP10.14□□□□□ -0.79
CDHR3-203ENST00000466045 DENND2DQ9H6A0 471 aaPredicted RBP10.14□□□□□ -0.79
CDHR3-203ENST00000466045 GPHNQ9NQX3 736 aaPredicted RBP10.14□□□□□ -0.79
CDHR3-203ENST00000466045 AASDHPPTQ9NRN7 309 aa10.14□□□□□ -0.79
CDHR3-203ENST00000466045 STX8Q9UNK0 236 aa10.14□□□□□ -0.79
CDHR3-203ENST00000466045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.14□□□□□ -0.79
CDHR3-203ENST00000466045 ERVV-2B6SEH9 535 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 RNF225M0QZC1 329 aaPredicted RBP10.13□□□□□ -0.79
CDHR3-203ENST00000466045 VILLO15195 856 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 AP1G1O43747 822 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 MYH10P35580 1976 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 CYLC1P35663 651 aaPredicted RBP10.13□□□□□ -0.79
CDHR3-203ENST00000466045 SLC16A2P36021 539 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 ETV3P41162 512 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 TUFMP49411 452 aaKnown RBP10.13□□□□□ -0.79
CDHR3-203ENST00000466045 HSPA14Q0VDF9 509 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 NMIQ13287 307 aaPredicted RBP10.13□□□□□ -0.79
CDHR3-203ENST00000466045 SEPT6Q14141 434 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 CRY1Q16526 586 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 RABL6Q3YEC7 729 aaPredicted RBP10.13□□□□□ -0.79
CDHR3-203ENST00000466045 LVRNQ6Q4G3 990 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 ACAD11Q709F0 780 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 VASH1Q7L8A9 365 aaPredicted RBP10.13□□□□□ -0.79
CDHR3-203ENST00000466045 TTC5Q8N0Z6 440 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 FBXL16Q8N461 479 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 ANKLE1Q8NAG6 615 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 SPATA20Q8TB22 786 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 DPF3Q92784 378 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 NMD3Q96D46 503 aaKnown RBP10.13□□□□□ -0.79
CDHR3-203ENST00000466045 TCEANC2Q96MN5 208 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 NLRP3Q96P20 1036 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 MYD88Q99836 296 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 NEURL2Q9BR09 285 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 UNKQ9C0B0 810 aaKnown RBP10.13□□□□□ -0.79
CDHR3-203ENST00000466045 LACRTQ9GZZ8 138 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 VTA1Q9NP79 307 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 AIPL1Q9NZN9 384 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 STX18Q9P2W9 335 aaKnown RBP10.13□□□□□ -0.79
CDHR3-203ENST00000466045 MED23Q9ULK4 1368 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 STXBP5LQ9Y2K9 1186 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 TELO2Q9Y4R8 837 aa10.13□□□□□ -0.79
CDHR3-203ENST00000466045 FUOMA2VDF0 154 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 ANKRD34BA5PLL1 514 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 SH2B2O14492 632 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 ADCY3O60266 1144 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 B4GALT4O60513 344 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 ZCCHC18P0CG32 403 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 RFX5P48382 616 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 HSD17B4P51659 736 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 RASA2Q15283 850 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 CCDC6Q16204 474 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 CFAP221Q4G0U5 840 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 SHC4Q6S5L8 630 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 OR2W6PQ8NHA6 318 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 PTCD2Q8WV60 388 aaKnown RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 RBM38Q9H0Z9 239 aaKnown RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 INTS9Q9NV88 658 aaKnown RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 LIMA1Q9UHB6 759 aaKnown RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 UBR2Q8IWV8 1755 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 CARMIL3Q8ND23 1372 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 ZSCAN5CA6NGD5 496 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 PIK3CDO00329 1044 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 KCNQ2O43526 872 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 GNA11P29992 359 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 CCR3P51677 355 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 HNRNPDQ14103 355 aaKnown RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 LPIN1Q14693 890 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 NONOQ15233 471 aaKnown RBP eCLIP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 NKX1-1Q15270 411 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 TGFBIQ15582 683 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 KRT71Q3SY84 523 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 EPHA10Q5JZY3 1008 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 FYB2Q5VWT5 728 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 TWF2Q6IBS0 349 aaKnown RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 TTC23LQ6PF05 361 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 C1orf228Q6PIY5 440 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 CAPN12Q6ZSI9 719 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 TRMT44Q8IYL2 757 aaKnown RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 OR7G1Q8NGA0 311 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 TTC8Q8TAM2 541 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 PIP4K2CQ8TBX8 421 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 PYROXD1Q8WU10 500 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 FAM227BQ96M60 508 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 NUP88Q99567 741 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 DDX50Q9BQ39 737 aaKnown RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 KRT82Q9NSB4 513 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 TYW1Q9NV66 732 aaKnown RBP10.12□□□□□ -0.79
CDHR3-203ENST00000466045 KIAA1257Q9ULG3 409 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 IKBKGQ9Y6K9 419 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 LAMA4Q16363 1823 aa10.12□□□□□ -0.79
CDHR3-203ENST00000466045 NUP188Q5SRE5 1749 aa10.11□□□□□ -0.79
CDHR3-203ENST00000466045 A0A1W2PQ67 120 aa10.11□□□□□ -0.79
CDHR3-203ENST00000466045 RCCD1A6NED2 376 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms