RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 MRPL44Q9H9J2 332 aaKnown RBP6.62□□□□□ -1.35
CHMP3-206ENST00000466032 XPNPEP3Q9NQH7 507 aa6.62□□□□□ -1.35
CHMP3-206ENST00000466032 DDX20Q9UHI6 824 aaKnown RBP6.62□□□□□ -1.35
CHMP3-206ENST00000466032 PTPN22Q9Y2R2 807 aa6.62□□□□□ -1.35
CHMP3-206ENST00000466032 TRIM17Q9Y577 477 aa6.62□□□□□ -1.35
CHMP3-206ENST00000466032 DOCK3Q8IZD9 2030 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 SMIM35A0A1B0GVV1 85 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 ESPNB1AK53 854 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 HAS3O00219 553 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 BIN1O00499 593 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 FOXN1O15353 648 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 HIP1RO75146 1068 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 CAND2O75155 1236 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 C6orf222P0C671 652 aaPredicted RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 ATP4AP20648 1035 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 EEF1GP26641 437 aaKnown RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 PRCPP42785 496 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 NCKAP1LP55160 1127 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 GTF2BQ00403 316 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 POU5F1Q01860 360 aaKnown RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 ENPEPQ07075 957 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 NCBP1Q09161 790 aaKnown RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 STRN3Q13033 797 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 PPFIA1Q13136 1202 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 EMC2Q15006 297 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 UGCGQ16739 394 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 KNOP1Q1ED39 458 aaKnown RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 DPCR1Q3MIW9 517 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 MTERF2Q49AM1 385 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 FILIP1LQ4L180 1135 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 FAM102BQ5T8I3 360 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 SMYD5Q6GMV2 418 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 SLFN12LQ6IEE8 588 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 CENPPQ6IPU0 288 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 TAF2Q6P1X5 1199 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 NFRKBQ6P4R8 1299 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 FBXO46Q6PJ61 603 aaPredicted RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 CTU1Q7Z7A3 348 aaKnown RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 ZNF410Q86VK4 478 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 SESTD1Q86VW0 696 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 ZBTB8OSQ8IWT0 167 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 GRAMD1CQ8IYS0 662 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 C7orf31Q8N865 590 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 STAMQ92783 540 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 COPS5Q92905 334 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 P2RX5Q93086 422 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 TRIM44Q96DX7 344 aaPredicted RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 PRIMPOLQ96LW4 560 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 CEP63Q96MT8 703 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 ACCSQ96QU6 501 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 UIMC1Q96RL1 719 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 ARID3AQ99856 593 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 RUSC1Q9BVN2 902 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 COL25A1Q9BXS0 654 aaPredicted RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 DNAJC25Q9H1X3 360 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 ZHX3Q9H4I2 956 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 THAP9Q9H5L6 903 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 TMEM134Q9H6X4 195 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 GRPEL1Q9HAV7 217 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 METTL14Q9HCE5 456 aaKnown RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 KIAA1586Q9HCI6 787 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 KMT5AQ9NQR1 393 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 TYW1Q9NV66 732 aaKnown RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 TBC1D7Q9P0N9 293 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 WRAP73Q9P2S5 460 aaPredicted RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 MAGEC2Q9UBF1 373 aaPredicted RBP6.61□□□□□ -1.35
CHMP3-206ENST00000466032 TRAF3IP3Q9Y228 551 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 PCDHA2Q9Y5H9 948 aa6.61□□□□□ -1.35
CHMP3-206ENST00000466032 SYNRGQ9UMZ2 1314 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 C17orf102A2RUQ5 167 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 MBLAC1A4D2B0 266 aaPredicted RBP6.6□□□□□ -1.35
CHMP3-206ENST00000466032 GOLGA6L6A8MZA4 724 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 KBTBD13C9JR72 458 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 CETN3O15182 167 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 MAPK13O15264 365 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 GCNT3O95395 438 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 LDHAP00338 332 aaKnown RBP6.6□□□□□ -1.35
CHMP3-206ENST00000466032 INHAP05111 366 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 INSRRP14616 1297 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 CDK11BP21127 795 aaKnown RBP6.6□□□□□ -1.35
CHMP3-206ENST00000466032 BRD2P25440 801 aaKnown RBP6.6□□□□□ -1.35
CHMP3-206ENST00000466032 ARL2P36404 184 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 NPEPPSP55786 919 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 FAM193AP78312 1265 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 PURAQ00577 322 aaKnown RBP6.6□□□□□ -1.35
CHMP3-206ENST00000466032 DMTNQ08495 405 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 STK4Q13043 487 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 IQCB1Q15051 598 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 KYAT1Q16773 422 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 KIAA0753Q2KHM9 967 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 SLC9C1Q4G0N8 1177 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 PRAMEF19Q5SWL8 479 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 EFCAB12Q6NXP0 572 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 SARM1Q6SZW1 724 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 EPM2AIP1Q7L775 607 aaPredicted RBP6.6□□□□□ -1.35
CHMP3-206ENST00000466032 HAUS6Q7Z4H7 955 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 SRGAP1Q7Z6B7 1085 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 FILIP1Q7Z7B0 1213 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 RPAINQ86UA6 219 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms