RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 ANKRD63C9JTQ0 380 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 PRKCBP05771 671 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 MRPS6P82932 125 aaKnown RBP18.89■□□□□ 0.61
PTPRU-206ENST00000465525 CDC42EP1Q00587 391 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 TLE2Q04725 743 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 CT47A1Q5JQC4 288 aaPredicted RBP18.89■□□□□ 0.61
PTPRU-206ENST00000465525 SPATA1Q5VX52 437 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 RPAINQ86UA6 219 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 RSPH3Q86UC2 560 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 HVCN1Q96D96 273 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 TSG101Q99816 390 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 C2orf40Q9H1Z8 148 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 SAMSN1Q9NSI8 373 aaKnown RBP18.89■□□□□ 0.61
PTPRU-206ENST00000465525 TYW1Q9NV66 732 aaKnown RBP18.89■□□□□ 0.61
PTPRU-206ENST00000465525 ATP11BQ9Y2G3 1177 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 CDY2AQ9Y6F7 541 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 SMTNL1A8MU46 457 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 GOLGA6L19H0YKK7 550 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 IKBKBO14920 756 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 B4GALT5O43286 388 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 EFNA5P52803 228 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 SLC39A4Q6P5W5 647 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 ZNF410Q86VK4 478 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 ZNF710Q8N1W2 664 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 CSGALNACT2Q8N6G5 542 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 TMEM40Q8WWA1 233 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 TARS2Q9BW92 718 aaKnown RBP18.88■□□□□ 0.61
PTPRU-206ENST00000465525 GBP3Q9H0R5 595 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 HSD3B7Q9H2F3 369 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 TMEM134Q9H6X4 195 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 TMEM206Q9H813 350 aa18.88■□□□□ 0.61
PTPRU-206ENST00000465525 FSD2A1L4K1 749 aa18.87■□□□□ 0.61
PTPRU-206ENST00000465525 PDXKO00764 312 aa18.87■□□□□ 0.61
PTPRU-206ENST00000465525 HNRNPDLO14979 420 aaKnown RBP18.87■□□□□ 0.61
PTPRU-206ENST00000465525 MAPK6Q16659 721 aa18.87■□□□□ 0.61
PTPRU-206ENST00000465525 TRIM71Q2Q1W2 868 aaKnown RBP18.87■□□□□ 0.61
PTPRU-206ENST00000465525 SRRTQ9BXP5 876 aaKnown RBP18.87■□□□□ 0.61
PTPRU-206ENST00000465525 CELF4Q9BZC1 486 aaKnown RBP18.87■□□□□ 0.61
PTPRU-206ENST00000465525 GCOM2Q9BZD3 368 aaPredicted RBP18.87■□□□□ 0.61
PTPRU-206ENST00000465525 PCIF1Q9H4Z3 704 aa18.87■□□□□ 0.61
PTPRU-206ENST00000465525 AGPAT3Q9NRZ7 376 aa18.87■□□□□ 0.61
PTPRU-206ENST00000465525 EXOC7Q9UPT5 735 aa18.87■□□□□ 0.61
PTPRU-206ENST00000465525 CALUO43852 315 aaPredicted RBP18.86■□□□□ 0.61
PTPRU-206ENST00000465525 CHRNA1P02708 482 aa18.86■□□□□ 0.61
PTPRU-206ENST00000465525 NR3C1P04150 777 aa18.86■□□□□ 0.61
PTPRU-206ENST00000465525 LIG4P49917 911 aa18.86■□□□□ 0.61
PTPRU-206ENST00000465525 LRRC63Q05C16 580 aa18.86■□□□□ 0.61
PTPRU-206ENST00000465525 POU5F1BQ06416 359 aa18.86■□□□□ 0.61
PTPRU-206ENST00000465525 FAAP100Q0VG06 881 aa18.86■□□□□ 0.61
PTPRU-206ENST00000465525 HS2ST1Q7LGA3 356 aa18.86■□□□□ 0.61
PTPRU-206ENST00000465525 CDR2LQ86X02 465 aaPredicted RBP18.86■□□□□ 0.61
PTPRU-206ENST00000465525 NOC3LQ8WTT2 800 aaKnown RBP18.86■□□□□ 0.61
PTPRU-206ENST00000465525 OSBPL7Q9BZF2 842 aa18.86■□□□□ 0.61
PTPRU-206ENST00000465525 TRAF3IP3Q9Y228 551 aa18.86■□□□□ 0.61
PTPRU-206ENST00000465525 TRPV2Q9Y5S1 764 aa18.86■□□□□ 0.61
PTPRU-206ENST00000465525 M0QZ92 97 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 CAND2O75155 1236 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 DARSP14868 501 aaKnown RBP18.85■□□□□ 0.61
PTPRU-206ENST00000465525 CYP2J2P51589 502 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 TMEM132AQ24JP5 1023 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 IFNLR1Q8IU57 520 aaPredicted RBP18.85■□□□□ 0.61
PTPRU-206ENST00000465525 CREBRFQ8IUR6 639 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 CCDC155Q8N6L0 562 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 ZSWIM2Q8NEG5 633 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 CAGE1Q8TC20 777 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 CPB2Q96IY4 423 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 ZBTB45Q96K62 511 aaPredicted RBP18.85■□□□□ 0.61
PTPRU-206ENST00000465525 CBWD1Q9BRT8 395 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 NFKBIZQ9BYH8 718 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 FZD8Q9H461 694 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 ATP1A3P13637 1013 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 NR2F2P24468 414 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 CRYBB1P53674 252 aaPredicted RBP18.85■□□□□ 0.61
PTPRU-206ENST00000465525 BFSP2Q13515 415 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 PRPF4BQ13523 1007 aaKnown RBP18.85■□□□□ 0.61
PTPRU-206ENST00000465525 AMHR2Q16671 573 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 ZNF618Q5T7W0 954 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 LRRC55Q6ZSA7 311 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 SRGAP1Q7Z6B7 1085 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 HTATIP2Q9BUP3 242 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 MRPL4Q9BYD3 311 aaKnown RBP18.85■□□□□ 0.61
PTPRU-206ENST00000465525 GRPEL1Q9HAV7 217 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 ANKFY1Q9P2R3 1169 aa18.85■□□□□ 0.61
PTPRU-206ENST00000465525 ACKR2O00590 384 aa18.84■□□□□ 0.61
PTPRU-206ENST00000465525 CLTBP09497 229 aa18.84■□□□□ 0.61
PTPRU-206ENST00000465525 HARSP12081 509 aaKnown RBP18.84■□□□□ 0.61
PTPRU-206ENST00000465525 ADSSP30520 456 aa18.84■□□□□ 0.61
PTPRU-206ENST00000465525 MATR3P43243 847 aaKnown RBP eCLIP18.84■□□□□ 0.61
PTPRU-206ENST00000465525 PLCB2Q00722 1185 aa18.84■□□□□ 0.61
PTPRU-206ENST00000465525 RBL2Q08999 1139 aa18.84■□□□□ 0.61
PTPRU-206ENST00000465525 MGAT3Q09327 533 aa18.84■□□□□ 0.61
PTPRU-206ENST00000465525 EDRF1Q3B7T1 1238 aa18.84■□□□□ 0.61
PTPRU-206ENST00000465525 ARMCX5Q6P1M9 558 aa18.84■□□□□ 0.61
PTPRU-206ENST00000465525 PPP4R3CPQ6ZMV5 832 aa18.84■□□□□ 0.61
PTPRU-206ENST00000465525 ZBTB33Q86T24 672 aa18.84■□□□□ 0.61
PTPRU-206ENST00000465525 IRF2BP1Q8IU81 584 aa18.84■□□□□ 0.61
PTPRU-206ENST00000465525 HAPLN2Q9GZV7 340 aa18.84■□□□□ 0.61
PTPRU-206ENST00000465525 PRMT7Q9NVM4 692 aaPredicted RBP18.84■□□□□ 0.61
PTPRU-206ENST00000465525 GOLGA8IPA6NC78 632 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 GOLGA8JA6NMD2 632 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms