RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 AKAP13Q12802 2813 aa16.92■□□□□ 0.3
HDAC6-214ENST00000465269 A0A087WZ62 844 aa16.91■□□□□ 0.3
HDAC6-214ENST00000465269 TMEM150BA6NC51 233 aa16.91■□□□□ 0.3
HDAC6-214ENST00000465269 IPO5O00410 1097 aaKnown RBP16.91■□□□□ 0.3
HDAC6-214ENST00000465269 ADAMTS3O15072 1205 aa16.91■□□□□ 0.3
HDAC6-214ENST00000465269 SOD2P04179 222 aa16.91■□□□□ 0.3
HDAC6-214ENST00000465269 RPL17P18621 184 aaKnown RBP16.91■□□□□ 0.3
HDAC6-214ENST00000465269 TMOD1P28289 359 aa16.91■□□□□ 0.3
HDAC6-214ENST00000465269 SMARCA1P28370 1054 aa16.91■□□□□ 0.3
HDAC6-214ENST00000465269 UGCGQ16739 394 aa16.91■□□□□ 0.3
HDAC6-214ENST00000465269 KXD1Q9BQD3 176 aa16.91■□□□□ 0.3
HDAC6-214ENST00000465269 SH2D3AQ9BRG2 576 aa16.91■□□□□ 0.3
HDAC6-214ENST00000465269 FDXACB1Q9BRP7 624 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-214ENST00000465269 HERC2P3Q9BVR0 1158 aa16.91■□□□□ 0.3
HDAC6-214ENST00000465269 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.91■□□□□ 0.3
HDAC6-214ENST00000465269 LAMA1P25391 3075 aa16.91■□□□□ 0.3
HDAC6-214ENST00000465269 SDK1Q7Z5N4 2213 aa16.9■□□□□ 0.3
HDAC6-214ENST00000465269 GCN1Q92616 2671 aaKnown RBP16.9■□□□□ 0.3
HDAC6-214ENST00000465269 IGLV3-22A0A075B6J6 115 aa16.9■□□□□ 0.3
HDAC6-214ENST00000465269 TBC1D4O60343 1298 aa16.9■□□□□ 0.3
HDAC6-214ENST00000465269 NCLP19338 710 aaKnown RBP16.9■□□□□ 0.3
HDAC6-214ENST00000465269 NFXL1Q6ZNB6 911 aa16.9■□□□□ 0.3
HDAC6-214ENST00000465269 GRASPQ7Z6J2 395 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-214ENST00000465269 KSR1Q8IVT5 923 aa16.9■□□□□ 0.3
HDAC6-214ENST00000465269 NETO1Q8TDF5 533 aa16.9■□□□□ 0.3
HDAC6-214ENST00000465269 PHKBQ93100 1093 aa16.9■□□□□ 0.3
HDAC6-214ENST00000465269 MAP3K14Q99558 947 aa16.9■□□□□ 0.3
HDAC6-214ENST00000465269 LZTS2Q9BRK4 669 aa16.9■□□□□ 0.3
HDAC6-214ENST00000465269 ANGPTL2Q9UKU9 493 aa16.9■□□□□ 0.3
HDAC6-214ENST00000465269 U3KPZ7 1027 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-214ENST00000465269 TGM5O43548 720 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 GAS2O43903 313 aaKnown RBP16.89■□□□□ 0.29
HDAC6-214ENST00000465269 ALDH2P05091 517 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 FSHRP23945 695 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 SREBF1P36956 1147 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 NAPAP54920 295 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 DMWDQ09019 674 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 MTAPQ13126 283 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 N4BP2L1Q5TBK1 243 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-214ENST00000465269 PRR23BQ6ZRT6 265 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 TPRG1Q6ZUI0 275 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 ZNF577Q9BSK1 485 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 RHOBTB2Q9BYZ6 727 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 GCOM2Q9BZD3 368 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-214ENST00000465269 PRKD2Q9BZL6 878 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 RIC8AQ9NPQ8 531 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 CEP131Q9UPN4 1083 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 PCDHB2Q9Y5E7 798 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 F5P12259 2224 aa16.89■□□□□ 0.29
HDAC6-214ENST00000465269 WDR81Q562E7 1941 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 HIP1O00291 1037 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 OATP04181 439 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 PSAPP07602 524 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 OR1G1P47890 313 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 GLUD2P49448 558 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 GNAQP50148 359 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 PRKCEQ02156 737 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 ZBTB41Q5SVQ8 909 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 JAKMIP3Q5VZ66 844 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 CYP26C1Q6V0L0 522 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 TMTC3Q6ZXV5 915 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 ITFG1Q8TB96 612 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 URGCPQ8TCY9 931 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 FAM193BQ96PV7 902 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-214ENST00000465269 RXFP1Q9HBX9 757 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 PRMT8Q9NR22 394 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-214ENST00000465269 CHST12Q9NRB3 414 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 FAM217BQ9NTX9 383 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-214ENST00000465269 SAMM50Q9Y512 469 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 PCDHA10Q9Y5I2 948 aa16.88■□□□□ 0.29
HDAC6-214ENST00000465269 SHISA7A6NL88 538 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 PRC1O43663 620 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 TDGF1P13385 188 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 PMLP29590 882 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 ADCY7P51828 1080 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 PRKCQQ04759 706 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 SRSF5Q13243 272 aaKnown RBP16.87■□□□□ 0.29
HDAC6-214ENST00000465269 FZD5Q13467 585 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 HDAC1Q13547 482 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-214ENST00000465269 ACAP1Q15027 740 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 ZNF746Q6NUN9 644 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-214ENST00000465269 CATSPER4Q7RTX7 472 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 RABGGTAQ92696 567 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 CLDN23Q96B33 292 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 TRAIPQ9BWF2 469 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 LRRC2Q9BYS8 371 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 SEMA4GQ9NTN9 838 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 TCEAL9Q9UHQ7 104 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 CDH7Q9ULB5 785 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 ITPR1Q14643 2758 aa16.87■□□□□ 0.29
HDAC6-214ENST00000465269 MTCL1Q9Y4B5 1905 aaKnown RBP16.86■□□□□ 0.29
HDAC6-214ENST00000465269 SH2B2O14492 632 aaPredicted RBP16.86■□□□□ 0.29
HDAC6-214ENST00000465269 ZNF623O75123 536 aa16.86■□□□□ 0.29
HDAC6-214ENST00000465269 EFEMP2O95967 443 aa16.86■□□□□ 0.29
HDAC6-214ENST00000465269 PRR23CQ6ZRP0 262 aa16.86■□□□□ 0.29
HDAC6-214ENST00000465269 NIPA1Q7RTP0 329 aa16.86■□□□□ 0.29
HDAC6-214ENST00000465269 FGF13Q92913 245 aa16.86■□□□□ 0.29
HDAC6-214ENST00000465269 GJA10Q969M2 543 aa16.86■□□□□ 0.29
HDAC6-214ENST00000465269 TMEM175Q9BSA9 504 aa16.86■□□□□ 0.29
HDAC6-214ENST00000465269 OSBPL6Q9BZF3 934 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms