RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 LCHNA4D1U4 455 aa5.67□□□□□ -1.5
VPS8-217ENST00000465213 C2orf78A6NCI8 922 aa5.67□□□□□ -1.5
VPS8-217ENST00000465213 H2AFYO75367 372 aaKnown RBP5.67□□□□□ -1.5
VPS8-217ENST00000465213 BPIP17213 487 aa5.67□□□□□ -1.5
VPS8-217ENST00000465213 SESN2P58004 480 aaPredicted RBP5.67□□□□□ -1.5
VPS8-217ENST00000465213 ATP2C1P98194 919 aaPredicted RBP5.67□□□□□ -1.5
VPS8-217ENST00000465213 OCRLQ01968 901 aa5.67□□□□□ -1.5
VPS8-217ENST00000465213 COL10A1Q03692 680 aa5.67□□□□□ -1.5
VPS8-217ENST00000465213 ACAP1Q15027 740 aa5.67□□□□□ -1.5
VPS8-217ENST00000465213 DHCR24Q15392 516 aa5.67□□□□□ -1.5
VPS8-217ENST00000465213 RNF187Q5TA31 235 aaPredicted RBP5.67□□□□□ -1.5
VPS8-217ENST00000465213 CCAR1Q8IX12 1150 aaKnown RBP5.67□□□□□ -1.5
VPS8-217ENST00000465213 ANKRD35Q8N283 1001 aa5.67□□□□□ -1.5
VPS8-217ENST00000465213 ZNF610Q8N9Z0 462 aa5.67□□□□□ -1.5
VPS8-217ENST00000465213 GFM2Q969S9 779 aaKnown RBP5.67□□□□□ -1.5
VPS8-217ENST00000465213 TMEM176AQ96HP8 235 aa5.67□□□□□ -1.5
VPS8-217ENST00000465213 EMC7Q9NPA0 242 aa5.67□□□□□ -1.5
VPS8-217ENST00000465213 MSRAQ9UJ68 235 aa5.67□□□□□ -1.5
VPS8-217ENST00000465213 A0A0A6YYK5 440 aaPredicted RBP5.66□□□□□ -1.5
VPS8-217ENST00000465213 FOXN1O15353 648 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 OPHN1O60890 802 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 RAMP2O60895 175 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 PARNO95453 639 aaKnown RBP5.66□□□□□ -1.5
VPS8-217ENST00000465213 LSP1P33241 339 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 STAT3P40763 770 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 ADCY7P51828 1080 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 CRHR2Q13324 411 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 SAFB2Q14151 953 aaKnown RBP eCLIP5.66□□□□□ -1.5
VPS8-217ENST00000465213 ZBTB41Q5SVQ8 909 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 STRA8Q7Z7C7 330 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 UBR7Q8N806 425 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 WDR92Q96MX6 357 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 CRAMP1Q96RY5 1269 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 SOX7Q9BT81 388 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 SLC2A4RGQ9NR83 387 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 POLR3BQ9NW08 1133 aaPredicted RBP5.66□□□□□ -1.5
VPS8-217ENST00000465213 USP36Q9P275 1121 aaKnown RBP5.66□□□□□ -1.5
VPS8-217ENST00000465213 DNAI1Q9UI46 699 aa5.66□□□□□ -1.5
VPS8-217ENST00000465213 REXO2Q9Y3B8 237 aaKnown RBP5.66□□□□□ -1.5
VPS8-217ENST00000465213 NEMP1O14524 444 aa5.65□□□□□ -1.5
VPS8-217ENST00000465213 MAP4K4O95819 1239 aaPredicted RBP5.65□□□□□ -1.5
VPS8-217ENST00000465213 HNRNPLP14866 589 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS8-217ENST00000465213 MASP1P48740 699 aa5.65□□□□□ -1.5
VPS8-217ENST00000465213 SLC25A3Q00325 362 aa5.65□□□□□ -1.5
VPS8-217ENST00000465213 BROXQ5VW32 411 aa5.65□□□□□ -1.5
VPS8-217ENST00000465213 ESPNLQ6ZVH7 1005 aa5.65□□□□□ -1.5
VPS8-217ENST00000465213 DDX46Q7L014 1031 aaKnown RBP5.65□□□□□ -1.5
VPS8-217ENST00000465213 CLEC14AQ86T13 490 aa5.65□□□□□ -1.5
VPS8-217ENST00000465213 C11orf74Q86VG3 221 aa5.65□□□□□ -1.5
VPS8-217ENST00000465213 SLC7A6OSQ96CW6 309 aaPredicted RBP5.65□□□□□ -1.5
VPS8-217ENST00000465213 SLKQ9H2G2 1235 aaPredicted RBP5.65□□□□□ -1.5
VPS8-217ENST00000465213 SLC6A15Q9H2J7 730 aa5.65□□□□□ -1.5
VPS8-217ENST00000465213 GPRC5BQ9NZH0 403 aa5.65□□□□□ -1.5
VPS8-217ENST00000465213 RBM8AQ9Y5S9 174 aaKnown RBP5.65□□□□□ -1.5
VPS8-217ENST00000465213 MYPNQ86TC9 1320 aa5.65□□□□□ -1.51
VPS8-217ENST00000465213 A0A1W2PRX2 142 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 PEX14O75381 377 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 PCDH8O95206 1070 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 ID4P47928 161 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 SCNN1GP51170 649 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 ADAM8P78325 824 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 DDB1Q16531 1140 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 APBB1IPQ7Z5R6 666 aaPredicted RBP5.64□□□□□ -1.51
VPS8-217ENST00000465213 SLC5A5Q92911 643 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 GCDHQ92947 438 aaPredicted RBP5.64□□□□□ -1.51
VPS8-217ENST00000465213 MIEF2Q96C03 454 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 GPHA2Q96T91 129 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 NOL10Q9BSC4 688 aaKnown RBP5.64□□□□□ -1.51
VPS8-217ENST00000465213 TMX1Q9H3N1 280 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 CAAP1Q9H8G2 361 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 TERF2IPQ9NYB0 399 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 CHPF2Q9P2E5 772 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 SYNPO2Q9UMS6 1093 aa5.64□□□□□ -1.51
VPS8-217ENST00000465213 PRSS38A1L453 326 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 TMEM191CA6NGB0 347 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 PFKMP08237 780 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 BPIFB4P59827 614 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 TCIRG1Q13488 830 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 TOB2Q14106 344 aaPredicted RBP5.63□□□□□ -1.51
VPS8-217ENST00000465213 ATP13A4Q4VNC1 1196 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 Q6ZRM9 215 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 FRMD7Q6ZUT3 714 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 CXorf67Q86X51 503 aaPredicted RBP5.63□□□□□ -1.51
VPS8-217ENST00000465213 RPUSD2Q8IZ73 545 aaKnown RBP5.63□□□□□ -1.51
VPS8-217ENST00000465213 ANKRD53Q8N9V6 530 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 PLA2G15Q8NCC3 412 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 USP7Q93009 1102 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 OSBPL6Q9BZF3 934 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 IFT22Q9H7X7 185 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 TNFRSF18Q9Y5U5 241 aa5.63□□□□□ -1.51
VPS8-217ENST00000465213 CREB3O43889 395 aa5.62□□□□□ -1.51
VPS8-217ENST00000465213 ZEB2O60315 1214 aa5.62□□□□□ -1.51
VPS8-217ENST00000465213 FBLP22087 321 aaKnown RBP5.62□□□□□ -1.51
VPS8-217ENST00000465213 MAN2A2P49641 1150 aa5.62□□□□□ -1.51
VPS8-217ENST00000465213 STRN3Q13033 797 aa5.62□□□□□ -1.51
VPS8-217ENST00000465213 RASSF3Q86WH2 238 aa5.62□□□□□ -1.51
VPS8-217ENST00000465213 LYSMD2Q8IV50 215 aa5.62□□□□□ -1.51
VPS8-217ENST00000465213 PPP1R14CQ8TAE6 165 aa5.62□□□□□ -1.51
VPS8-217ENST00000465213 FERMT2Q96AC1 680 aa5.62□□□□□ -1.51
VPS8-217ENST00000465213 HIST1H2AHQ96KK5 128 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms